Miyakogusa Predicted Gene

Lj2g3v1573050.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1573050.1 Non Chatacterized Hit- tr|C5BPE3|C5BPE3_TERTT
Putative lipoprotein OS=Teredinibacter turnerae (strai,40.62,4.2,
,CUFF.37615.1
         (340 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62609 weakly similar to UniRef100_Q0E354 Cluster: Os0...   674   0.0  

>gnl|LJGI|TC62609 weakly similar to UniRef100_Q0E354 Cluster: Os02g0193500 protein;
           n=2; Oryza sativa|Rep: Os02g0193500 protein - Oryza
           sativa subsp. japonica (Rice), partial (37%)
          Length = 857

 Score =  674 bits (340), Expect = 0.0
 Identities = 340/340 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgagcgaatttctgatggatcaacaaggccttccattacaacaagctgatccagcagtc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 atgagcgaatttctgatggatcaacaaggccttccattacaacaagctgatccagcagtc 489

                                                                       
Query: 61  caatcttctcatcttcaagggacttcacctcatactcaacttcccttagctctttcccta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 caatcttctcatcttcaagggacttcacctcatactcaacttcccttagctctttcccta 429

                                                                       
Query: 121 atgcaaagctctcatcctccaacatcatatacttccgcctcaatgcgcggtactcatttc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 atgcaaagctctcatcctccaacatcatatacttccgcctcaatgcgcggtactcatttc 369

                                                                       
Query: 181 caccagcagatgagtcaggcaacgaatctgaattggaaccctcttgtttctgaaaaggtg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 caccagcagatgagtcaggcaacgaatctgaattggaaccctcttgtttctgaaaaggtg 309

                                                                       
Query: 241 gcgagacttcagtcatcaagtgtcttttggaacccttctgtccagattttaccgacagag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gcgagacttcagtcatcaagtgtcttttggaacccttctgtccagattttaccgacagag 249

                                                   
Query: 301 gaacatgtccatcttccttcacattgttcccttgcaactg 340
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gaacatgtccatcttccttcacattgttcccttgcaactg 209