Miyakogusa Predicted Gene
- Lj2g3v1560790.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1560790.1 tr|D4P3K3|D4P3K3_SOYBN Glycine and proline rich
protein 3 OS=Glycine max GN=GPRP3 PE=2
SV=1,61.74,3e-18,seg,NULL,CUFF.37485.1
(528 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72141 similar to UniRef100_Q0DL76 Cluster: Os05g01193... 1047 0.0
gnl|LJGI|BP042746 similar to UniRef100_A7PSK5 Cluster: Chromosom... 464 e-130
gnl|LJGI|BP042116 similar to UniRef100_Q0DL76 Cluster: Os05g0119... 82 4e-15
gnl|LJGI|TC71608 similar to UniRef100_Q0DL76 Cluster: Os05g01193... 82 4e-15
>gnl|LJGI|TC72141 similar to UniRef100_Q0DL76 Cluster: Os05g0119300 protein; n=2;
Oryza sativa|Rep: Os05g0119300 protein - Oryza sativa
subsp. japonica (Rice), partial (60%)
Length = 952
Score = 1047 bits (528), Expect = 0.0
Identities = 528/528 (100%)
Strand = Plus / Plus
Query: 1 atgggaggtggaaaggacaacaatggtcaagatgaagacaagggagttttctcacatctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 atgggaggtggaaaggacaacaatggtcaagatgaagacaagggagttttctcacatctg 136
Query: 61 gctcatgggatagctggagcttctcatgggtacccacctggggcataccctccaccacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 gctcatgggatagctggagcttctcatgggtacccacctggggcataccctccaccacca 196
Query: 121 ccaggggcatatcctgggtacccacctcagggataccctccacagcctggtcatggatac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 ccaggggcatatcctgggtacccacctcagggataccctccacagcctggtcatggatac 256
Query: 181 cctccacaacatgggtatcctccacaacctggttacccccctcaaggctatcctcctgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 cctccacaacatgggtatcctccacaacctggttacccccctcaaggctatcctcctgct 316
Query: 241 gggtatcctcctcaacatggttatcccccagctggttatcctggtcactctgctgggcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gggtatcctcctcaacatggttatcccccagctggttatcctggtcactctgctgggcat 376
Query: 301 ggcggtatgggagcaatgcttgctggcggtgctgctgccgcagctgctgcatatggggct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ggcggtatgggagcaatgcttgctggcggtgctgctgccgcagctgctgcatatggggct 436
Query: 361 caccatgtttcccatggccactatggacatggcggttatgggcatggtggttttatgcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 caccatgtttcccatggccactatggacatggcggttatgggcatggtggttttatgcca 496
Query: 421 catgggaaattcaagcatggcaagttcaagcatggaaagttcggcaagcatgggaaattt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 catgggaaattcaagcatggcaagttcaagcatggaaagttcggcaagcatgggaaattt 556
Query: 481 aagcatggcaagttcggcaagcatggattattcaggaagtggaagtga 528
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 aagcatggcaagttcggcaagcatggattattcaggaagtggaagtga 604
>gnl|LJGI|BP042746 similar to UniRef100_A7PSK5 Cluster: Chromosome chr6 scaffold_28,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_28, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 486
Score = 464 bits (234), Expect = e-130
Identities = 234/234 (100%)
Strand = Plus / Minus
Query: 295 gggcatggcggtatgggagcaatgcttgctggcggtgctgctgccgcagctgctgcatat 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 gggcatggcggtatgggagcaatgcttgctggcggtgctgctgccgcagctgctgcatat 354
Query: 355 ggggctcaccatgtttcccatggccactatggacatggcggttatgggcatggtggtttt 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ggggctcaccatgtttcccatggccactatggacatggcggttatgggcatggtggtttt 294
Query: 415 atgccacatgggaaattcaagcatggcaagttcaagcatggaaagttcggcaagcatggg 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 atgccacatgggaaattcaagcatggcaagttcaagcatggaaagttcggcaagcatggg 234
Query: 475 aaatttaagcatggcaagttcggcaagcatggattattcaggaagtggaagtga 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 aaatttaagcatggcaagttcggcaagcatggattattcaggaagtggaagtga 180
>gnl|LJGI|BP042116 similar to UniRef100_Q0DL76 Cluster: Os05g0119300 protein; n=2;
Oryza sativa|Rep: Os05g0119300 protein - Oryza sativa
subsp. japonica (Rice), partial (25%)
Length = 527
Score = 81.8 bits (41), Expect = 4e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 298 catggcggtatgggagcaatgcttgctggcggtgctgctgccgcagctgctgcatatggg 357
|||||||| ||||| |||||||||||||| ||||||||||| ||||||||||| |||||
Sbjct: 407 catggcggcatgggtgcaatgcttgctgggggtgctgctgctgcagctgctgcttatggc 348
Query: 358 gctca 362
|||||
Sbjct: 347 gctca 343
>gnl|LJGI|TC71608 similar to UniRef100_Q0DL76 Cluster: Os05g0119300 protein; n=2;
Oryza sativa|Rep: Os05g0119300 protein - Oryza sativa
subsp. japonica (Rice), partial (59%)
Length = 830
Score = 81.8 bits (41), Expect = 4e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 298 catggcggtatgggagcaatgcttgctggcggtgctgctgccgcagctgctgcatatggg 357
|||||||| ||||| |||||||||||||| ||||||||||| ||||||||||| |||||
Sbjct: 395 catggcggcatgggtgcaatgcttgctgggggtgctgctgctgcagctgctgcttatggc 454
Query: 358 gctca 362
|||||
Sbjct: 455 gctca 459
Score = 71.9 bits (36), Expect = 4e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 223 caaggctatcctcctgctgggtatcctcctcaacatggttatcccccagctggttatcct 282
||||| ||||| || ||||||||||| || ||||| || |||||||||||||||||||||
Sbjct: 296 caagggtatcccccagctgggtatcccccacaacaagggtatcccccagctggttatcct 355
Query: 283 ggtc 286
||||
Sbjct: 356 ggtc 359
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 84 tcatgggtacccacctggggcataccctcc 113
||||||||||||||||||||||||||||||
Sbjct: 208 tcatgggtacccacctggggcataccctcc 237