Miyakogusa Predicted Gene
- Lj2g3v1560740.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1560740.2 Non Chatacterized Hit- tr|B8LR96|B8LR96_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,35.79,0.00000005,RNASE L INHIBITOR,NULL; ATP-BINDING TRANSPORT
PROTEIN-RELATED,NULL; no description,NULL; P-loop cont,CUFF.37576.2
(699 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60707 homologue to UniRef100_A7QKL9 Cluster: Chromoso... 400 e-111
gnl|LJGI|GO036372 homologue to UniRef100_A7QKL9 Cluster: Chromos... 246 2e-64
gnl|LJGI|BW594890 weakly similar to UniRef100_Q7ZVF6 Cluster: AT... 62 5e-09
gnl|LJGI|BW599466 similar to UniRef100_A8J4L1 Cluster: Predicted... 62 5e-09
gnl|LJGI|TC76895 weakly similar to UniRef100_A8J4L1 Cluster: Pre... 62 5e-09
gnl|LJGI|TC73186 similar to UniRef100_O49679 Cluster: RNase L in... 62 5e-09
gnl|LJGI|TC77727 weakly similar to UniRef100_A7QKL9 Cluster: Chr... 58 8e-08
>gnl|LJGI|TC60707 homologue to UniRef100_A7QKL9 Cluster: Chromosome chr2 scaffold_113,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_113, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (50%)
Length = 1067
Score = 400 bits (202), Expect = e-111
Identities = 202/202 (100%)
Strand = Plus / Plus
Query: 1 atgtttgatgaaccttctagttatcttgatgtgaaacaaaggctgaaagctgcccaagtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 atgtttgatgaaccttctagttatcttgatgtgaaacaaaggctgaaagctgcccaagtc 925
Query: 61 attcgatcattgctcaggcctaacagctatgtaattgttgtagagcacgatcttagtgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 926 attcgatcattgctcaggcctaacagctatgtaattgttgtagagcacgatcttagtgtc 985
Query: 121 ttggactacttatcggactttatttgctgcttgtatggcaaacctggtgcatatggagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 986 ttggactacttatcggactttatttgctgcttgtatggcaaacctggtgcatatggagtg 1045
Query: 181 gtaacccttcctttctcagtca 202
||||||||||||||||||||||
Sbjct: 1046 gtaacccttcctttctcagtca 1067
>gnl|LJGI|GO036372 homologue to UniRef100_A7QKL9 Cluster: Chromosome chr2
scaffold_113, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr2 scaffold_113, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (29%)
Length = 813
Score = 246 bits (124), Expect = 2e-64
Identities = 127/128 (99%)
Strand = Plus / Plus
Query: 572 caactgttagacacttactgcaccaaaaaattcgtgatgcatatacccatccccagtttg 631
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2 caactgttagacacttactgcaccaaaaaattcgtgatgcatatacccatccccagcttg 61
Query: 632 tatcagatgttatgaagccacttcttatcgaacaattaatggaccaagaagttgtgaatc 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tatcagatgttatgaagccacttcttatcgaacaattaatggaccaagaagttgtgaatc 121
Query: 692 tttctggt 699
||||||||
Sbjct: 122 tttctggt 129
>gnl|LJGI|BW594890 weakly similar to UniRef100_Q7ZVF6 Cluster: ATP-binding cassette,
sub-family E (OABP), member 1; n=1; Danio rerio|Rep:
ATP-binding cassette, sub-family E (OABP), member 1 -
Danio rerio (Zebrafish) (Brachydanio rerio), partial
(10%)
Length = 470
Score = 61.9 bits (31), Expect = 5e-09
Identities = 88/107 (82%)
Strand = Plus / Plus
Query: 391 ggagaatttactgattctcaaattattgtgatgctgggtgagaatgggaccggaaagaca 450
||||||||||| | ||| |||||||||| || | |||| || ||||| ||||||||
Sbjct: 277 ggagaatttacaaaatctgaaattattgtcattcagggtctcaaggggacaggaaagacc 336
Query: 451 acatttattcgtatgctggctggtttattgaagcctgactctgtaga 497
||| ||||| | |||||||||||| |||||||||||||| ||||||
Sbjct: 337 acacttattaggatgctggctggtgaattgaagcctgactttgtaga 383
>gnl|LJGI|BW599466 similar to UniRef100_A8J4L1 Cluster: Predicted protein; n=1;
Chlamydomonas reinhardtii|Rep: Predicted protein -
Chlamydomonas reinhardtii, partial (15%)
Length = 486
Score = 61.9 bits (31), Expect = 5e-09
Identities = 88/107 (82%)
Strand = Plus / Plus
Query: 391 ggagaatttactgattctcaaattattgtgatgctgggtgagaatgggaccggaaagaca 450
||||||||||| | ||| |||||||||| || | |||| || ||||| ||||||||
Sbjct: 321 ggagaatttacaaaatctgaaattattgtcattcagggtctcaaggggacaggaaagacc 380
Query: 451 acatttattcgtatgctggctggtttattgaagcctgactctgtaga 497
||| ||||| | |||||||||||| |||||||||||||| ||||||
Sbjct: 381 acacttattaggatgctggctggtgaattgaagcctgactttgtaga 427
>gnl|LJGI|TC76895 weakly similar to UniRef100_A8J4L1 Cluster: Predicted protein; n=1;
Chlamydomonas reinhardtii|Rep: Predicted protein -
Chlamydomonas reinhardtii, partial (27%)
Length = 1418
Score = 61.9 bits (31), Expect = 5e-09
Identities = 88/107 (82%)
Strand = Plus / Plus
Query: 391 ggagaatttactgattctcaaattattgtgatgctgggtgagaatgggaccggaaagaca 450
||||||||||| | ||| |||||||||| || | |||| || ||||| ||||||||
Sbjct: 454 ggagaatttacaaaatctgaaattattgtcattcagggtctcaaggggacaggaaagacc 513
Query: 451 acatttattcgtatgctggctggtttattgaagcctgactctgtaga 497
||| ||||| | |||||||||||| |||||||||||||| ||||||
Sbjct: 514 acacttattaggatgctggctggtgaattgaagcctgactttgtaga 560
Score = 58.0 bits (29), Expect = 8e-08
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 620 atccccagtttgtatcagatgttatgaagccacttcttatcgaacaattaatggaccaag 679
||||||| |||| |||| |||||||| |||||||||||||| || || |||||||||
Sbjct: 662 atccccactttgaatcacatgttatgcagccacttcttatccctcacttcatggaccaac 721
Query: 680 aagttgtgaatctttct 696
|||||| |||||||||
Sbjct: 722 aagttgccaatctttct 738
>gnl|LJGI|TC73186 similar to UniRef100_O49679 Cluster: RNase L inhibitor-like
protein; n=1; Arabidopsis thaliana|Rep: RNase L
inhibitor-like protein - Arabidopsis thaliana (Mouse-ear
cress), partial (11%)
Length = 494
Score = 61.9 bits (31), Expect = 5e-09
Identities = 88/107 (82%)
Strand = Plus / Plus
Query: 391 ggagaatttactgattctcaaattattgtgatgctgggtgagaatgggaccggaaagaca 450
||||||||||| | ||| |||||||||| || | |||| || ||||| ||||||||
Sbjct: 284 ggagaatttacaaaatctgaaattattgtcattcagggtctcaaggggacaggaaagacc 343
Query: 451 acatttattcgtatgctggctggtttattgaagcctgactctgtaga 497
||| ||||| | |||||||||||| |||||||||||||| ||||||
Sbjct: 344 acacttattaggatgctggctggtgaattgaagcctgactttgtaga 390
>gnl|LJGI|TC77727 weakly similar to UniRef100_A7QKL9 Cluster: Chromosome chr2
scaffold_113, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr2 scaffold_113, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (9%)
Length = 841
Score = 58.0 bits (29), Expect = 8e-08
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 620 atccccagtttgtatcagatgttatgaagccacttcttatcgaacaattaatggaccaag 679
||||||| |||| |||| |||||||| |||||||||||||| || || |||||||||
Sbjct: 174 atccccactttgaatcacatgttatgcagccacttcttatccctcacttcatggaccaac 233
Query: 680 aagttgtgaatctttct 696
|||||| |||||||||
Sbjct: 234 aagttgccaatctttct 250