Miyakogusa Predicted Gene
- Lj2g3v1560730.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1560730.1 tr|G7JB64|G7JB64_MEDTR Kinase-like protein
OS=Medicago truncatula GN=MTR_3g070220 PE=4
SV=1,72.83,0,PROTEIN_KINASE_DOM,Protein kinase, catalytic domain;
LRR,Leucine-rich repeat; Leucine-rich repeats, ,gene.g41875.t1.1
(2730 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS352914 weakly similar to UniRef100_UPI0000048B80 Clus... 404 e-111
gnl|LJGI|TC75059 similar to UniRef100_Q2R2E4 Cluster: Leucine Ri... 208 1e-52
gnl|LJGI|BW594621 similar to UniRef100_A7Q3E9 Cluster: Chromosom... 182 8e-45
gnl|LJGI|FS351385 weakly similar to UniRef100_A7QQU5 Cluster: Ch... 70 8e-11
gnl|LJGI|BP084736 weakly similar to UniRef100_A7PVF0 Cluster: Ch... 68 3e-10
gnl|LJGI|BP084360 weakly similar to UniRef100_Q0JEP0 Cluster: Os... 56 1e-06
gnl|LJGI|FS350626 weakly similar to UniRef100_A7PP31 Cluster: Ch... 54 5e-06
>gnl|LJGI|FS352914 weakly similar to UniRef100_UPI0000048B80 Cluster: EFR (EF-TU
RECEPTOR); ATP binding / kinase/ protein serine/threonine
kinase; n=1; Arabidopsis thaliana|Rep: EFR (EF-TU
RECEPTOR); ATP binding / kinase/ protein serine/threonine
kinase - Arabidopsis thaliana, partial (8%)
Length = 738
Score = 404 bits (204), Expect = e-111
Identities = 419/491 (85%), Gaps = 6/491 (1%)
Strand = Plus / Minus
Query: 2207 atgattccatggtagctcacgtgagtgattttggcttagcaaaattgctcccatgtattg 2266
|||||| | |||||||||||||||| ||||||||||||||||||||||| |||| |||||
Sbjct: 738 atgattgcttggtagctcacgtgagcgattttggcttagcaaaattgctaccatctattg 679
Query: 2267 gagtctcccagatgcaaaacagcacaggtggaataaaggggactattggctatgctcctc 2326
|||||||||||||||||| ||||||| |||||||||||||||| |||| ||||||||||
Sbjct: 678 gagtctcccagatgcaaagcagcacacttggaataaaggggactgttggttatgctcctc 619
Query: 2327 cagagtatggaatgggttcagaggtttcaattgagggtgacatgtttagctttggaattc 2386
||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||
Sbjct: 618 cagagtatggaatgggttctgaggtttcaattgaaggtgacatgtatagctttggaattc 559
Query: 2387 ttgttttagaaatgttaactggaaagagtcccactgatgaaatgttcaaagatggtcata 2446
| |||||||||||||||||||||| ||| ||||| ||||||||||| ||||||||||||
Sbjct: 558 tagttttagaaatgttaactggaaggagacccacagatgaaatgtttgaagatggtcata 499
Query: 2447 atctccataattatgttgaactttcaatttcagaaagtcttatgcaaattgtggacccga 2506
||||||||||||||||| | |||| || ||| | || |||| ||||||||||| |
Sbjct: 498 atctccataattatgttaagatttccatctcaaatgacctcttgcagattgtggacccaa 439
Query: 2507 ttatcctccaaaatgaatttaatcaggctactgaggatgggaaccttggcattgtgcagt 2566
| | |||| |||| ||| | || |||| | ||| ||||||||||||
Sbjct: 438 ctcttgtccacaatggattagactggggtactaacagtggagaccttggcattg------ 385
Query: 2567 tgcaacctaatgcagagaaatgtttactttcacttttgagaattgcacttgcatgttcaa 2626
|||| ||||||| |||||||||||||||||||||||| || |||||||||||||| ||
Sbjct: 384 tgcatcctaatgtagagaaatgtttactttcactttttagtattgcacttgcatgctccg 325
Query: 2627 tggaatcaccaaaagaaagaatgagtatgattgatgtcataagggagcttaacttaatca 2686
||||||| ||||||| ||||||||||||| ||||||||||||| ||||| || ||||||
Sbjct: 324 tggaatcgccaaaagcaagaatgagtatggttgatgtcataagagagctcaatataatca 265
Query: 2687 aaaggttcttc 2697
|||| ||||||
Sbjct: 264 aaagcttcttc 254
>gnl|LJGI|TC75059 similar to UniRef100_Q2R2E4 Cluster: Leucine Rich Repeat family
protein, expressed; n=1; Oryza sativa Japonica Group|Rep:
Leucine Rich Repeat family protein, expressed - Oryza
sativa subsp. japonica (Rice), partial (11%)
Length = 502
Score = 208 bits (105), Expect = 1e-52
Identities = 168/189 (88%)
Strand = Plus / Plus
Query: 1858 gttgccataaaggtcctaaaccttcaaaagaaaggagctcacaagagtttcattgctgaa 1917
|||||| |||||||| | |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 154 gttgccgtaaaggtcttgaaccttcaaaagaagggagctcacaagagtttcattgctgaa 213
Query: 1918 tgtaatgcactcaaaaatattagacatcgaaatctggtgaagaatttaacatgttgttcc 1977
||||||||||| ||||||||||||||||| |||||||| |||| ||||||||||||||
Sbjct: 214 tgtaatgcactaaaaaatattagacatcggaatctggttaagatcttaacatgttgttct 273
Query: 1978 agtacagattacaaaggtcaagagtttaaagctctagtttttgagtacatgaccaacgga 2037
|| | || ||||||||||||| ||||||||||||||||| |||||||||| || |||
Sbjct: 274 agctctgacaacaaaggtcaagaatttaaagctctagttttcgagtacatgaaaaatgga 333
Query: 2038 agcttagaa 2046
|| ||||||
Sbjct: 334 agtttagaa 342
>gnl|LJGI|BW594621 similar to UniRef100_A7Q3E9 Cluster: Chromosome chr13 scaffold_48,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_48, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 473
Score = 182 bits (92), Expect = 8e-45
Identities = 356/444 (80%)
Strand = Plus / Plus
Query: 1477 ccaactaaaggtgtctttggaaatgcaagtgaggtggtggtaactggaaacaataacctt 1536
||||| |||||||||||| ||||||||||| | ||||| || ||||| | || ||
Sbjct: 30 ccaacaaaaggtgtctttaaaaatgcaagtgcattagtggtgaccggaaatagaaagcta 89
Query: 1537 tgtggaggtatttcaaagctgcatctaccgccatgccctgctaaaggtaacaaacatgca 1596
|||||||| |||||| |||||||||||| ||||||||||| ||||||| || ||||||
Sbjct: 90 tgtggaggcatttcagagctgcatctactgccatgccctgtcaaaggtataaagcatgca 149
Query: 1597 aaacaccataattccaggttgatagcagtgatagttagtgtggttgcttttctccttata 1656
||||||||||||| || ||||||||||||| | || ||||| || |||||||| || ||
Sbjct: 150 aaacaccataatttcatgttgatagcagtggtggtaagtgttgtggcttttcttctcatt 209
Query: 1657 ctgtcacttattctatctatcctctggatgaggacaagaaacaagaaaacacttcctgat 1716
|||||| |||||||| | || || ||||| || ||| ||||||||| || | |||||
Sbjct: 210 ctgtcatttattctaaccatgtacttgatgaagaaaaggaacaagaaatcatcttctgat 269
Query: 1717 tcaccaacaatagatcaactggctatggtttcatatcaaaacctacacaatggaaccgaa 1776
|||||||||| || || ||||||| | ||||||| || | || || ||||||||
Sbjct: 270 acaccaacaattgaccagctggctaagatttcataccacgatctgcatcgtggaaccggt 329
Query: 1777 gggttctcaagtagatgtttgatagggtctggaaattttggctctgtttacaaaggaact 1836
||||||||| |||| ||||| || | |||| |||||| || || |||| ||||| |
Sbjct: 330 gggttctcagctagaaacttgattggtttaggaagttttggttccgtgtacagaggaaat 389
Query: 1837 ctagagtcagaagaaagagccgttgccataaaggtcctaaaccttcaaaagaaaggagct 1896
| | ||||||||| | || || ||||||||||| |||||||| |||||||| ||||||
Sbjct: 390 attgtgtcagaagataaagatgtagccataaaggtgctaaacctccaaaagaagggagct 449
Query: 1897 cacaagagtttcattgctgaatgt 1920
||||||||||||||||||||||||
Sbjct: 450 cacaagagtttcattgctgaatgt 473
>gnl|LJGI|FS351385 weakly similar to UniRef100_A7QQU5 Cluster: Chromosome undetermined
scaffold_144, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_144, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(6%)
Length = 666
Score = 69.9 bits (35), Expect = 8e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 2596 tcacttttgagaattgcacttgcatgttcaatggaatcaccaaaagaaagaatga 2650
|||||||| || |||| |||||| |||||| ||||||||||||||||||||||||
Sbjct: 530 tcactttttaggattggacttgcttgttcagtggaatcaccaaaagaaagaatga 476
>gnl|LJGI|BP084736 weakly similar to UniRef100_A7PVF0 Cluster: Chromosome chr9
scaffold_33, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr9 scaffold_33, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 452
Score = 67.9 bits (34), Expect = 3e-10
Identities = 79/94 (84%)
Strand = Plus / Minus
Query: 2596 tcacttttgagaattgcacttgcatgttcaatggaatcaccaaaagaaagaatgagtatg 2655
|||||||| || |||| |||||| ||||||||||||||||||| |||||| |||| ||
Sbjct: 367 tcactttttaggattggacttgcttgttcaatggaatcaccaagagaaaggatgaagata 308
Query: 2656 attgatgtcataagggagcttaacttaatcaaaa 2689
| |||||||| || ||||| ||| |||||||||
Sbjct: 307 gtggatgtcattagagagctaaacataatcaaaa 274
>gnl|LJGI|BP084360 weakly similar to UniRef100_Q0JEP0 Cluster: Os04g0227000 protein;
n=1; Oryza sativa Japonica Group|Rep: Os04g0227000
protein - Oryza sativa subsp. japonica (Rice), partial
(7%)
Length = 381
Score = 56.0 bits (28), Expect = 1e-06
Identities = 88/108 (81%)
Strand = Plus / Minus
Query: 2365 gacatgtttagctttggaattcttgttttagaaatgttaactggaaagagtcccactgat 2424
||||||| |||||| || |||||||| || |||||| | || |||| || ||||| |||
Sbjct: 364 gacatgtatagcttcgggattcttgtgttggaaatgcttaccggaagaaggcccacagat 305
Query: 2425 gaaatgttcaaagatggtcataatctccataattatgttgaactttca 2472
||||||||| |||| ||||| ||||| || || | ||||||| |||||
Sbjct: 304 gaaatgttcgaagacggtcaaaatctgcacaagtttgttgaaatttca 257
>gnl|LJGI|FS350626 weakly similar to UniRef100_A7PP31 Cluster: Chromosome chr8
scaffold_23, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_23, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (57%)
Length = 630
Score = 54.0 bits (27), Expect = 5e-06
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 2596 tcacttttgagaattgcacttgcatgttcaatggaatcaccaaaagaaagaatga 2650
|||||||| || |||| |||| | ||||||||||||||||||| |||||| ||||
Sbjct: 318 tcactttttaggattggacttacttgttcaatggaatcaccaagagaaaggatga 264