Miyakogusa Predicted Gene

Lj2g3v1560720.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1560720.1 FS319800.path2.1
         (238 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS319800 weakly similar to UniRef100_A7Q3E6 Cluster: Ch...   456   e-128
gnl|LJGI|FS326600                                                     339   5e-93

>gnl|LJGI|FS319800 weakly similar to UniRef100_A7Q3E6 Cluster: Chromosome chr13
           scaffold_48, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr13 scaffold_48, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (5%)
          Length = 246

 Score =  456 bits (230), Expect = e-128
 Identities = 236/238 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgttgcacttgcatgcatcttggcctacgtgccttcacatcttacttctatttactttg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   atgttgcacttgcatgcatcttggcctacgtgccttcacatcttacttctatttactttg 67

                                                                       
Query: 61  aactcattgttgtttacaacagcctctgcatcatcaaacgagaccgatcattttgcacta 120
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  aactctttgttgtttacaacagcctctgcatcatcaaacgagaccgatcattttgcacta 127

                                                                       
Query: 121 ctcaaattcaaggaagctatatccagtgatccatatggaatcctagattcttggaatagc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ctcaaattcaaggaagctatatccagtgatccatatggaatcctagattcttggaatagc 187

                                                                     
Query: 181 tcaacccacttctgcaagtggcatggagtcacatgcagccccttgaatcaaagggtta 238
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 188 tcaacccacttctgcaagtggtatggagtcacatgcagccccttgaatcaaagggtta 245


>gnl|LJGI|FS326600 
          Length = 271

 Score =  339 bits (171), Expect = 5e-93
 Identities = 213/227 (93%)
 Strand = Plus / Plus

                                                                       
Query: 5   tgcacttgcatgcatcttggcctacgtgccttcacatcttacttctatttactttgaact 64
           |||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||
Sbjct: 45  tgcacttgcatgcatcttgctctgtgtgccttcacatcttacttctatttactttgaact 104

                                                                       
Query: 65  cattgttgtttacaacagcctctgcatcatcaaacgagaccgatcattttgcactactca 124
           ||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 105 cattgttttttacaacagcctctgcatcatcaaacgagatcgaccattttgcactactca 164

                                                                       
Query: 125 aattcaaggaagctatatccagtgatccatatggaatcctagattcttggaatagctcaa 184
           ||||||| |||||||||||||||||||||||||||||||||||||||||||||   || |
Sbjct: 165 aattcaaagaagctatatccagtgatccatatggaatcctagattcttggaatgcttcta 224

                                                          
Query: 185 cccacttctgcaagtggcatggagtcacatgcagccccttgaatcaa 231
           | ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 225 cacacttctgcaagtggcatggaatcacatgcagccccttgaatcaa 271