Miyakogusa Predicted Gene

Lj2g3v1550560.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1550560.2 Non Chatacterized Hit- tr|I1J6S2|I1J6S2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.32505
PE,48.51,4e-19,seg,NULL; FDF,FDF domain; SCD6 PROTEIN-RELATED,NULL;
DFDF,DFDF domain; FFD,FFD box,CUFF.37454.2
         (561 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75329 similar to UniRef100_Q5ZFS5 Cluster: Nod factor...    60   2e-08

>gnl|LJGI|TC75329 similar to UniRef100_Q5ZFS5 Cluster: Nod factor-like protein; n=1;
           Plantago major|Rep: Nod factor-like protein - Plantago
           major (Common plantain), partial (70%)
          Length = 1635

 Score = 60.0 bits (30), Expect = 2e-08
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                       
Query: 142 ttcactgaagagttcgattttgaggccatgaatgaaaagttcaaaaaggatgaagtatgg 201
           ||||||||||| || |||||   ||| |||||||| || |||||||||||||||||||||
Sbjct: 896 ttcactgaagattttgatttcacggcaatgaatgagaaattcaaaaaggatgaagtatgg 955

             
Query: 202 gg 203
           ||
Sbjct: 956 gg 957