Miyakogusa Predicted Gene
- Lj2g3v1550280.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1550280.1 CUFF.37471.1
(1683 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS335253 similar to UniRef100_A7QKP4 Cluster: Chromosom... 1515 0.0
gnl|LJGI|TC64906 similar to UniRef100_A7QKP5 Cluster: Chromosome... 1074 0.0
gnl|LJGI|FS331337 similar to UniRef100_A7QKP4 Cluster: Chromosom... 274 2e-72
gnl|LJGI|FS357492 similar to UniRef100_A7QKP5 Cluster: Chromosom... 141 2e-32
>gnl|LJGI|FS335253 similar to UniRef100_A7QKP4 Cluster: Chromosome chr2 scaffold_113,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_113, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (63%)
Length = 764
Score = 1515 bits (764), Expect = 0.0
Identities = 764/764 (100%)
Strand = Plus / Plus
Query: 84 gacatacaatggccttgagagttgcattttaaacaatcagtcttatgaagaagagagcag 143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gacatacaatggccttgagagttgcattttaaacaatcagtcttatgaagaagagagcag 60
Query: 144 aactagtagaggagatgggtgtataactgattcatttgatgaagacgattccagttgttc 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aactagtagaggagatgggtgtataactgattcatttgatgaagacgattccagttgttc 120
Query: 204 ctctagcaaagatgcttctggatcattctcttcaaattgtttgagaatgaaaagagatga 263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctctagcaaagatgcttctggatcattctcttcaaattgtttgagaatgaaaagagatga 180
Query: 264 aaagggattggaagaatggaaagtctctcaaagtcctcaacgtttttatgccaaagagaa 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaagggattggaagaatggaaagtctctcaaagtcctcaacgtttttatgccaaagagaa 240
Query: 324 gaagcctgcttatgtcatgcaacattcagatatagaagccatgaaggagaaattttcaaa 383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaagcctgcttatgtcatgcaacattcagatatagaagccatgaaggagaaattttcaaa 300
Query: 384 gctcttgctaggggaagatgttacaggaggaactaagggcctcagcacagctttggctct 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gctcttgctaggggaagatgttacaggaggaactaagggcctcagcacagctttggctct 360
Query: 444 gtctaatgccatcacaaaccttgcggtaacggtttttggtgagctatggaaattggaacc 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtctaatgccatcacaaaccttgcggtaacggtttttggtgagctatggaaattggaacc 420
Query: 504 tttatgtgaagaaaggaagaacaaatggcgaagagaaatggagtggttactgtctcctac 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tttatgtgaagaaaggaagaacaaatggcgaagagaaatggagtggttactgtctcctac 480
Query: 564 taactatatggttgaacttgttcctgctaagcaaatcagtgccaatggtgggaggatctt 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 taactatatggttgaacttgttcctgctaagcaaatcagtgccaatggtgggaggatctt 540
Query: 624 tgagattatgaccccgaaagctcgtgcagacatccacatgaatcttccggcgcttcagaa 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgagattatgaccccgaaagctcgtgcagacatccacatgaatcttccggcgcttcagaa 600
Query: 684 gttagactctatgcttattgaggctttagattctatggtggatacagagttttggtatgc 743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gttagactctatgcttattgaggctttagattctatggtggatacagagttttggtatgc 660
Query: 744 tgagggaggaagccgtgccgaagggaggaactcgagtgcacggcatagccaacgatggtg 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tgagggaggaagccgtgccgaagggaggaactcgagtgcacggcatagccaacgatggtg 720
Query: 804 gcttccatcaccccaagtaccaaaaaatggcctttctgatactg 847
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gcttccatcaccccaagtaccaaaaaatggcctttctgatactg 764
>gnl|LJGI|TC64906 similar to UniRef100_A7QKP5 Cluster: Chromosome chr2 scaffold_113,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_113, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (44%)
Length = 710
Score = 1074 bits (542), Expect = 0.0
Identities = 560/566 (98%)
Strand = Plus / Plus
Query: 1118 cattgaaagaaaagattacagaacaagttagtcgcaaatccccagctcgaacctcatggt 1177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cattgaaagaaaagattacagaacaagttagtcgcaaatccccagctcgaacctcatggt 60
Query: 1178 cttttgtgaaggactctctgtcagaagtagataaaatggggttattaatggaccgtgcag 1237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cttttgtgaaggactctctgtcagaagtagataaaatggggttattaatggaccgtgcag 120
Query: 1238 aaacactcttacagctgcttaaaatcagattcccaaaccttcctccaacatttctagatg 1297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaacactcttacagctgcttaaaatcagattcccaaaccttcctccaacatttctagatg 180
Query: 1298 ctactaaagttcaatatggcaaggatattggacattccattttggaagcttactccagag 1357
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 181 ctactaaagttcaatatggcaaggatattggacattcccttttggaagcttactccagag 240
Query: 1358 ttcttggaaacttagctttcagcatattgtctagaataagagatatattgcaggaggatt 1417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttcttggaaacttagctttcagcatattgtctagaataagagatatattgcaggaggatt 300
Query: 1418 cttttagcaatcccaattcgcctgcggcggcgataaatctctctgaaacttgggtggtgg 1477
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cttttagcaatccccattcgcctgcggcggcgataaatctctctgaaacttgggtggtgg 360
Query: 1478 gttctcatgtaagacactccttacttgacaaaatgaacaaggcaaatggacaatgttgtg 1537
||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||
Sbjct: 361 gttctcatgtaagacactccttacttgaccaaatgaaccaggcaaatggaccatgttgtg 420
Query: 1538 attctagttttgatagtacttcagatttagaactatctattgatgccaaatccagtgttg 1597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 attctagttttgatagtacttcagatttagaactatctattgatgccaaatccagtgttg 480
Query: 1598 aaatagctacaccaagccggagtagtgcctggtgtattagtagagaggcttgtacaagtg 1657
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaatagctacacccagccggagtagtgcctggtgtattagtagagaggcttgtacaagtg 540
Query: 1658 tgtctcctcaaaattccccatagtgg 1683
||||||||||||||||||||||||||
Sbjct: 541 tgtctcctcaaaattccccatagtgg 566
>gnl|LJGI|FS331337 similar to UniRef100_A7QKP4 Cluster: Chromosome chr2 scaffold_113,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_113, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 752
Score = 274 bits (138), Expect = 2e-72
Identities = 389/472 (82%), Gaps = 3/472 (0%)
Strand = Plus / Plus
Query: 13 agaaaaagactagcttgctgcaccagggagaggactattagcatcgattttgatcagcaa 72
|||||||||||| |||||||| ||||||| | | |||||||| |||| ||| ||| |
Sbjct: 284 agaaaaagactaacttgctgcgccagggaaaccaaaattagcattgattatgacgagcca 343
Query: 73 cagaggattatgacatacaatggccttgagagttgcattttaaacaatcagtcttatgaa 132
| |||||||||||||| |||||||||||| | |||||| | | ||||| |||||||||
Sbjct: 344 gataggattatgacatataatggccttgagggctgcattcttgataatcaatcttatgaa 403
Query: 133 gaagagagcagaactagtagaggagatgggtgtataactgattcatttgatgaagacgat 192
|| || ||||||||||||||||||||||| ||||||||||||||||| |||| || ||
Sbjct: 404 gatgaaagcagaactagtagaggagatggatgtataactgattcattcaatgacgatgac 463
Query: 193 tccagttgttcctctagcaaagatgcttctggatcattctcttcaaattgtttgagaatg 252
||||||||||| || || |||||||||| || ||||||||||| || |||||| ||||
Sbjct: 464 tccagttgttcatccagtaaagatgcttttgattcattctcttcgaaatgtttgccaatg 523
Query: 253 aaaagagatgaaaagggattggaagaatggaaagtctctcaaagtcctcaacgtttttat 312
||||| |||||| | ||||||||||| ||| || |||| |||| ||||||| |||||||
Sbjct: 524 aaaagggatgaacatggattggaagattgggaactctcagaaagccctcaacatttttat 583
Query: 313 gccaaagagaagaagcctgcttatgtcatgcaacattcagatatagaagccatgaaggag 372
|||| |||||||||| | | | | ||| |||||||| ||||||||||||| ||
Sbjct: 584 atgaaag---agaagcctgcatctaccgtccaatattcagatgtagaagccatgaaagaa 640
Query: 373 aaattttcaaagctcttgctaggggaagatgttacaggaggaactaagggcctcagcaca 432
|| ||| ||||||| |||||||| || |||||||||||||||||||||||| | ||||
Sbjct: 641 aagtttgcaaagctgttgctaggtgatgatgttacaggaggaactaagggctctaacaca 700
Query: 433 gctttggctctgtctaatgccatcacaaaccttgcggtaacggtttttggtg 484
||||| || ||||| ||||||||||| ||||| || || |||||||| ||||
Sbjct: 701 gctttagcactgtccaatgccatcactaacctagcagtgacggttttcggtg 752
>gnl|LJGI|FS357492 similar to UniRef100_A7QKP5 Cluster: Chromosome chr2 scaffold_113,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_113, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 538
Score = 141 bits (71), Expect = 2e-32
Identities = 110/123 (89%)
Strand = Plus / Minus
Query: 1314 tggcaaggatattggacattccattttggaagcttactccagagttcttggaaacttagc 1373
||||||||||||||| |||||||||||||||| || ||||||||||||||||| |||||
Sbjct: 538 tggcaaggatattgggtattccattttggaagcatattccagagttcttggaaatttagc 479
Query: 1374 tttcagcatattgtctagaataagagatatattgcaggaggattcttttagcaatcccaa 1433
|||||||| | || |||||| |||||||||||||||||||| |||| |||||||||||
Sbjct: 478 cttcagcatcctatcaagaataggagatatattgcaggaggatgctttaagcaatcccaa 419
Query: 1434 ttc 1436
|||
Sbjct: 418 ttc 416