Miyakogusa Predicted Gene
- Lj2g3v1550220.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1550220.3 Non Chatacterized Hit- tr|I1L148|I1L148_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,67.78,0,Leucine-rich repeats, typical (most populate,Leucine-rich
repeat, typical subtype; Serine/Threonine ,CUFF.37433.3
(2787 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75059 similar to UniRef100_Q2R2E4 Cluster: Leucine Ri... 672 0.0
gnl|LJGI|BW594621 similar to UniRef100_A7Q3E9 Cluster: Chromosom... 442 e-123
gnl|LJGI|FS350626 weakly similar to UniRef100_A7PP31 Cluster: Ch... 246 6e-64
gnl|LJGI|BP084360 weakly similar to UniRef100_Q0JEP0 Cluster: Os... 86 1e-15
gnl|LJGI|FS326600 74 5e-12
gnl|LJGI|BP055282 weakly similar to UniRef100_Q0JEP0 Cluster: Os... 54 5e-06
>gnl|LJGI|TC75059 similar to UniRef100_Q2R2E4 Cluster: Leucine Rich Repeat family
protein, expressed; n=1; Oryza sativa Japonica Group|Rep:
Leucine Rich Repeat family protein, expressed - Oryza
sativa subsp. japonica (Rice), partial (11%)
Length = 502
Score = 672 bits (339), Expect = 0.0
Identities = 459/499 (91%)
Strand = Plus / Plus
Query: 2065 tcttctgatacaccaacaattgaccaactggctaagatttcataccacgacctacatcat 2124
||||||||| |||||||||| ||||| ||| ||||||||||||||||||||| ||||||
Sbjct: 4 tcttctgattcaccaacaatagaccagttggttaagatttcataccacgacctgcatcat 63
Query: 2125 ggaaccggtggattctcagctggaaacttgataggatcaggaagttttggttctgtgtac 2184
|| || ||||| ||||||||| |||||||||| |||||||||||||||||||| ||||||
Sbjct: 64 ggtactggtgggttctcagctagaaacttgattggatcaggaagttttggttcagtgtac 123
Query: 2185 aaaggaaatattgtgtcagcagataaagatgttgccataaaggtcttgaaccttcaaaag 2244
| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 124 ataggaaatattgtgtcagaagataaagatgttgccgtaaaggtcttgaaccttcaaaag 183
Query: 2245 aagggagctcacaagagtttcattgttgaatgtaatgcactcaaaaatatcagacatcgg 2304
||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||
Sbjct: 184 aagggagctcacaagagtttcattgctgaatgtaatgcactaaaaaatattagacatcgg 243
Query: 2305 aatctggttaagatcttaacatgctgttccagcacagacaacagaggtcaagattttaaa 2364
||||||||||||||||||||||| ||||| ||| | ||||||| ||||||||| ||||||
Sbjct: 244 aatctggttaagatcttaacatgttgttctagctctgacaacaaaggtcaagaatttaaa 303
Query: 2365 gctttagtttttgagtacatgaaaaatggaagcttagaacaatggctgcatccagggaat 2424
||| ||||||| |||||||||||||||||||| |||||||| ||||| |||||| |||
Sbjct: 304 gctctagttttcgagtacatgaaaaatggaagtttagaacagtggcttcatccaaggagg 363
Query: 2425 ggaagtgaagagcttcgtgaaccacttgaccttgaacaaagattaagtatcattgttgat 2484
||||||| |||||||| ||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 364 ggaagtgtagagcttcatgaaccactggaccttgaacaaagattaagtatcatcattgat 423
Query: 2485 gttgcttctgcattacattatctgcatcaagaatgtgagcaagtggtccttcattgtgat 2544
||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 424 gttgcttatgctttacattatctgcatcaagaatgtgagcaggtggtccttcattgtgat 483
Query: 2545 ataaagccaagcaatgtcc 2563
|||||||||||||||||||
Sbjct: 484 ataaagccaagcaatgtcc 502
>gnl|LJGI|BW594621 similar to UniRef100_A7Q3E9 Cluster: Chromosome chr13 scaffold_48,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_48, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 473
Score = 442 bits (223), Expect = e-123
Identities = 400/459 (87%)
Strand = Plus / Plus
Query: 1819 ttggagggagaagtaccaacaaaaggtgtctttcaaaatgtcagtgcattagcgatgacg 1878
||||| |||||||| |||||||||||||||||| |||||| |||||||||| | ||||
Sbjct: 15 ttggacggagaagtgccaacaaaaggtgtctttaaaaatgcaagtgcattagtggtgacc 74
Query: 1879 ggaaacaaaaaactttgtgggggtattccagagctgcatttactgccatgtcccgtcaaa 1938
||||| | ||| || ||||| || ||| ||||||||||| |||||||||| || ||||||
Sbjct: 75 ggaaatagaaagctatgtggaggcatttcagagctgcatctactgccatgccctgtcaaa 134
Query: 1939 agtatgaagcatgtaaaacaccatagtttcaagtggatagcagtggtagttagtctggtt 1998
|||| ||||||| ||||||||||| ||||| || |||||||||||| || ||| | ||
Sbjct: 135 ggtataaagcatgcaaaacaccataatttcatgttgatagcagtggtggtaagtgttgtg 194
Query: 1999 gtctttcttctcatgttgtcatttgttctaaccatctactggatgaggaaaagaaacaag 2058
| ||||||||||| |||||||| |||||||||| |||| ||||| |||||| ||||||
Sbjct: 195 gcttttcttctcattctgtcatttattctaaccatgtacttgatgaagaaaaggaacaag 254
Query: 2059 aaacagtcttctgatacaccaacaattgaccaactggctaagatttcataccacgaccta 2118
||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 255 aaatcatcttctgatacaccaacaattgaccagctggctaagatttcataccacgatctg 314
Query: 2119 catcatggaaccggtggattctcagctggaaacttgataggatcaggaagttttggttct 2178
|||| |||||||||||| ||||||||| |||||||||| || | |||||||||||||||
Sbjct: 315 catcgtggaaccggtgggttctcagctagaaacttgattggtttaggaagttttggttcc 374
Query: 2179 gtgtacaaaggaaatattgtgtcagcagataaagatgttgccataaaggtcttgaacctt 2238
||||||| ||||||||||||||||| |||||||||||| ||||||||||| | |||||
Sbjct: 375 gtgtacagaggaaatattgtgtcagaagataaagatgtagccataaaggtgctaaacctc 434
Query: 2239 caaaagaagggagctcacaagagtttcattgttgaatgt 2277
||||||||||||||||||||||||||||||| |||||||
Sbjct: 435 caaaagaagggagctcacaagagtttcattgctgaatgt 473
>gnl|LJGI|FS350626 weakly similar to UniRef100_A7PP31 Cluster: Chromosome chr8
scaffold_23, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_23, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (57%)
Length = 630
Score = 246 bits (124), Expect = 6e-64
Identities = 139/144 (96%)
Strand = Plus / Minus
Query: 2644 cagcaaagtagtacgatcggaataaaagggactcttggctatgctgctcctgagtatgga 2703
||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||
Sbjct: 627 cagcaaagtagtacgatcggaataaaaggaactcttagctatgctgctccagagtatgga 568
Query: 2704 gtgctttctgaagtgtccacatgtggcgacatatatagcttcgggatccttgtattggaa 2763
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gtgggttctgaagtgtccacatgtggcgacatatatagcttcgggatccttgtattggaa 508
Query: 2764 atgcttactggaagaagacctaca 2787
||||||||||||||||||||||||
Sbjct: 507 atgcttactggaagaagacctaca 484
>gnl|LJGI|BP084360 weakly similar to UniRef100_Q0JEP0 Cluster: Os04g0227000 protein;
n=1; Oryza sativa Japonica Group|Rep: Os04g0227000
protein - Oryza sativa subsp. japonica (Rice), partial
(7%)
Length = 381
Score = 85.7 bits (43), Expect = 1e-15
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 2714 aagtgtccacatgtggcgacatatatagcttcgggatccttgtattggaaatgcttactg 2773
||||||||||| ||||||||| |||||||||||||| ||||| |||||||||||||| |
Sbjct: 381 aagtgtccacacatggcgacatgtatagcttcgggattcttgtgttggaaatgcttaccg 322
Query: 2774 gaagaag 2780
|||||||
Sbjct: 321 gaagaag 315
>gnl|LJGI|FS326600
Length = 271
Score = 73.8 bits (37), Expect = 5e-12
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 157 ccatatggaattctagattcatggaatcattctacccacttttgcatgtggcatggaatt 216
||||||||||| |||||||| |||||| |||||| ||||| |||| ||||||||||||
Sbjct: 191 ccatatggaatcctagattcttggaatgcttctacacacttctgcaagtggcatggaatc 250
Query: 217 acatgcagc 225
|||||||||
Sbjct: 251 acatgcagc 259
>gnl|LJGI|BP055282 weakly similar to UniRef100_Q0JEP0 Cluster: Os04g0227000 protein;
n=1; Oryza sativa Japonica Group|Rep: Os04g0227000
protein - Oryza sativa subsp. japonica (Rice), partial
(6%)
Length = 482
Score = 54.0 bits (27), Expect = 5e-06
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 2737 tatagcttcgggatccttgtattggaaatgcttac 2771
|||||||||||||| || |||||||||||||||||
Sbjct: 472 tatagcttcgggattctagtattggaaatgcttac 438