Miyakogusa Predicted Gene

Lj2g3v1550110.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1550110.1 Non Chatacterized Hit- tr|I1L7N9|I1L7N9_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,79.4,0,PPR,Pentatricopeptide repeat; PPR_2,Pentatricopeptide
repeat; PPR: pentatricopeptide repeat domain,P,CUFF.37414.1
         (2059 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS318804 similar to UniRef100_A8JIG9 Cluster: Cytochrom...   212   7e-54

>gnl|LJGI|FS318804 similar to UniRef100_A8JIG9 Cluster: Cytochrome P450; n=1;
           Chlamydomonas reinhardtii|Rep: Cytochrome P450 -
           Chlamydomonas reinhardtii, partial (4%)
          Length = 782

 Score =  212 bits (107), Expect = 7e-54
 Identities = 280/338 (82%), Gaps = 6/338 (1%)
 Strand = Plus / Plus

                                                                       
Query: 17  ttgcatccctcaagaattttgtataccatggccacttgtcaaacgcattcaaatctttcc 76
           |||||||| ||||| ||||| ||   ||||| ||||||||||| ||| ||||| | ||| 
Sbjct: 449 ttgcatccttcaaggattttttaactcatgggcacttgtcaaatgcagtcaaaacgttca 508

                                                                       
Query: 77  ttcacatacagcaccatgctgcagcttcttctcctgggttttcccatcttctcttgcacc 136
           ||||||||||||| ||||| |      |||||||||||||||||||| || ||| || ||
Sbjct: 509 ttcacatacagcatcatgcag------cttctcctgggttttcccatattgtctcgcgcc 562

                                                                       
Query: 137 ccatttgcactcttctcttgggttgcatcaacgttaactcactttcaccagggaagcagc 196
           ||||| || |||||||||||||||||||||| ||||| || |||||||  ||||||||||
Sbjct: 563 ccattagctctcttctcttgggttgcatcaaagttaagtctctttcacaggggaagcagc 622

                                                                       
Query: 197 ttcatgcccaagtcatttcactgggttttgatcaaaatacaatcatgcttcccaggcttg 256
           |||||||||| || |||  |||||||||||||||||||    |  || || | |||||| 
Sbjct: 623 ttcatgcccatgttattcaactgggttttgatcaaaatcatgtattggtttctaggcttt 682

                                                                       
Query: 257 ttagtttctatgcaaggttcaatctctttgatgatgcttgcattgtcactgagagttcta 316
           ||  ||| ||| |||| ||||||||  ||||||||||||| | |||||||||||| ||||
Sbjct: 683 ttcatttttatacaagattcaatctacttgatgatgcttgtactgtcactgagagctcta 742

                                                 
Query: 317 gtagtttggagcctttgcattggaacatgctaatctca 354
            ||||||||| |||||||||||||||||||| ||||||
Sbjct: 743 atagtttggaccctttgcattggaacatgcttatctca 780