Miyakogusa Predicted Gene

Lj2g3v1550100.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1550100.1 Non Chatacterized Hit- tr|I1L596|I1L596_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26817
PE,80.14,0,Nodulin-like,Nodulin-like; no description,NULL; seg,NULL;
ADR278WP,NULL; UNCHARACTERIZED NODULIN-LIK,CUFF.37419.1
         (1725 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AU252186 similar to UniRef100_A7QKQ5 Cluster: Chromosom...    90   5e-17

>gnl|LJGI|AU252186 similar to UniRef100_A7QKQ5 Cluster: Chromosome chr2 scaffold_113,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_113, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (13%)
          Length = 350

 Score = 89.7 bits (45), Expect = 5e-17
 Identities = 147/181 (81%)
 Strand = Plus / Minus

                                                                       
Query: 127 gttcaactcaattacctcgccaccgccaacgatatgggcaaattcttcggctggtcctcc 186
           ||||| |||||||| ||||||||||| || |||||||| ||  | ||||| ||||| || 
Sbjct: 322 gttcagctcaattatctcgccaccgcgaatgatatggggaaggttttcggttggtcgtcg 263

                                                                       
Query: 187 ggtctcgctttctcctaccttcccctcactgtcgttatgttcattgctgcttccatggga 246
           || || |||||    || ||||| ||  || |||| |||||||| |||||||||||||| 
Sbjct: 262 gggcttgctttgatgtatcttcctctgtctttcgtcatgttcatcgctgcttccatgggt 203

                                                                       
Query: 247 gtcattggttatgggcttcagtggcttgtcattgagaacatcatcactttgccttatttt 306
            ||||||||||||| |||||||||||||| ||  |  |  ||||||||||||||||||||
Sbjct: 202 ttcattggttatggccttcagtggcttgtgatcaaccatgtcatcactttgccttatttt 143

            
Query: 307 c 307
           |
Sbjct: 142 c 142