Miyakogusa Predicted Gene

Lj2g3v1550040.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1550040.1 Non Chatacterized Hit- tr|I1J846|I1J846_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,87.29,0,no
description,NULL; Src homology,Src homology-3 domain;
coiled-coil,NULL; UNCHARACTERIZED,NULL; SH2,CUFF.37415.1
         (1092 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79930 similar to UniRef100_A7QVZ5 Cluster: Chromosome...  1223   0.0  
gnl|LJGI|BW595978 similar to UniRef100_A7QVZ5 Cluster: Chromosom...   591   e-168

>gnl|LJGI|TC79930 similar to UniRef100_A7QVZ5 Cluster: Chromosome chr2 scaffold_196,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_196, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (51%)
          Length = 756

 Score = 1223 bits (617), Expect = 0.0
 Identities = 620/621 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggatgctatacggaagcaagctagcaagttgagagagcaagttgccaggcaacaacag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 atggatgctatacggaagcaagctagcaagttgagagagcaagttgccaggcaacaacag 195

                                                                       
Query: 61  gctatacttagacaattgggccaacttagcaatgaatcgctcatgactgatgaatctgaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 gctatacttagacaattgggccaacttagcaatgaatcgctcatgactgatgaatctgaa 255

                                                                       
Query: 121 attgagtgtcatcagcaactgcagaagttatacacttctacaaagacagctaagcatttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 attgagtgtcatcagcaactgcagaagttatacacttctacaaagacagctaagcatttt 315

                                                                       
Query: 181 cagcggcatattgttcgcggtattgaaggattcgttgctgttagttccaagcagatggag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 cagcggcatattgttcgcggtattgaaggattcgttgctgttagttccaagcagatggag 375

                                                                       
Query: 241 atagtaagaaagttggcgaaggacttctgtaaatatgggaccgagaatcaaggcagtact 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 atagtaagaaagttggcgaaggacttctgtaaatatgggaccgagaatcaaggcagtact 435

                                                                       
Query: 301 taccctctttcaagggcttctattcaattgggtaactcgtatgatatagtggagaatgag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 taccctctttcaagggcttctattcaattgggtaactcgtatgatatagtggagaatgag 495

                                                                       
Query: 361 agggagactttgcttgggatcttaggtgatcagatttctgagccactgcgggcacaaata 420
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 agggagactttacttgggatcttaggtgatcagatttctgagccactgcgggcacaaata 555

                                                                       
Query: 421 acaggagctcctctagaggatgcacgccacctcactcaccgctatgataaacttcggcaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 acaggagctcctctagaggatgcacgccacctcactcaccgctatgataaacttcggcaa 615

                                                                       
Query: 481 gaggtagaagcgcaggctgctgaagttttgaggcgtcgatcaaagttgagggattcttct 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 gaggtagaagcgcaggctgctgaagttttgaggcgtcgatcaaagttgagggattcttct 675

                                                                       
Query: 541 gtttctgcagacagttctatgaggcttcaaaatgcagaaacaaggtcgaaagagcttaaa 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gtttctgcagacagttctatgaggcttcaaaatgcagaaacaaggtcgaaagagcttaaa 735

                                
Query: 601 tctgccttggtggcacttggt 621
           |||||||||||||||||||||
Sbjct: 736 tctgccttggtggcacttggt 756


>gnl|LJGI|BW595978 similar to UniRef100_A7QVZ5 Cluster: Chromosome chr2 scaffold_196,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr2 scaffold_196, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (19%)
          Length = 480

 Score =  591 bits (298), Expect = e-168
 Identities = 301/302 (99%)
 Strand = Plus / Plus

                                                                        
Query: 791  catcatttcctctgccaaaagatggacacaatcaacctgcagatgagaatgctaattcaa 850
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 10   catcatttcctctgccaaaagatggacacaatctacctgcagatgagaatgctaattcaa 69

                                                                        
Query: 851  acagcattgattataaacaacacagtcaaacaggcacatacttttttgcaaaggtaatac 910
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70   acagcattgattataaacaacacagtcaaacaggcacatacttttttgcaaaggtaatac 129

                                                                        
Query: 911  atccatttgatgctcaagcagagggggagttaaatctatcagttgatgattatgttgtag 970
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130  atccatttgatgctcaagcagagggggagttaaatctatcagttgatgattatgttgtag 189

                                                                        
Query: 971  ttcgccaggttggttccaatggatggtctgaaggagaatgcaaaggaaacgctggatggt 1030
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190  ttcgccaggttggttccaatggatggtctgaaggagaatgcaaaggaaacgctggatggt 249

                                                                        
Query: 1031 ttccctctgcttatgtacagagacaggacttaataccagccagcaagataacggaataaa 1090
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250  ttccctctgcttatgtacagagacaggacttaataccagccagcaagataacggaataaa 309

              
Query: 1091 gt 1092
            ||
Sbjct: 310  gt 311