Miyakogusa Predicted Gene
- Lj2g3v1549750.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1549750.1 tr|Q9LVV0|Q9LVV0_ARATH Emb|CAB82814.1
OS=Arabidopsis thaliana GN=At5g53020 PE=4
SV=1,36.51,1e-18,coiled-coil,NULL; seg,NULL; TRANSCRIPTION FACTOR
X1-LIKE,NULL; RIBONUCLEASE P PROTEIN SUBUNIT P38-RE,CUFF.37394.1
(1254 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61496 similar to UniRef100_A7QQ28 Cluster: Chromosome... 2464 0.0
gnl|LJGI|BP057546 similar to UniRef100_A7QQ28 Cluster: Chromosom... 613 e-174
>gnl|LJGI|TC61496 similar to UniRef100_A7QQ28 Cluster: Chromosome chr2 scaffold_140,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_140, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (64%)
Length = 1450
Score = 2464 bits (1243), Expect = 0.0
Identities = 1253/1255 (99%), Gaps = 1/1255 (0%)
Strand = Plus / Plus
Query: 1 atggcaacagcagcagcagaccaagaacaacaagatgacgctcacctcctccgttcctac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 atggcaacagcagcagcagaccaagaacaacaagatgacgctcacctcctccgttcctac 115
Query: 61 attggcctcagcttctccgtcttcctcgccctactccccaccaacctccgcaccaaggcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 attggcctcagcttctccgtcttcctcgccctactccccaccaacctccgcaccaaggcg 175
Query: 121 cgtgacctcacgcgcgccgaggaggagctgtcccagatgcgctcccgccgccgggaggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 cgtgacctcacgcgcgccgaggaggagctgtcccagatgcgctcccgccgccgggaggat 235
Query: 181 tccaaggccaacgccagagtcgccgagatcttcgcctcccaccgcaacgcctggcgcgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 tccaaggccaacgccagagtcgccgagatcttcgcctcccaccgcaacgcctggcgcgac 295
Query: 241 gaggagaagcgcctgctacgccggatcgacgcggcgggggaggagatcgcgcgcctcagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gaggagaagcgcctgctacgccggatcgacgcggcgggggaggagatcgcgcgcctcagg 355
Query: 301 gccgcggcggaggagtccagagccagggcggaggagctcgagcgcgaggtggcggagaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gccgcggcggaggagtccagagccagggcggaggagctcgagcgcgaggtggcggagaga 415
Query: 361 gacgagatgattgagttcatgtcgaggaggattcatgaggaagggttgggtggttgccag 420
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 416 gacgagatgattgagttcatgtcgaggaggattcatgaggaagggttcggtggttgccag 475
Query: 421 agtagggaccactatggtgggaagaagaatcaggagtggtttcacaatgagcaggaagag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 agtagggaccactatggtgggaagaagaatcaggagtggtttcacaatgagcaggaagag 535
Query: 481 gaggaggtggggaccaccaggaatgtggaggaagagggagtggaggttatctatgaacac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 gaggaggtggggaccaccaggaatgtggaggaagagggagtggaggttatctatgaacac 595
Query: 541 aaacaccaccactctcagtctcagtctcagcacctagttgataataatgggtttgatgct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 aaacaccaccactctcagtctcagtctcagcacctagttgataataatgggtttgatgct 655
Query: 601 gagttcatggcttctgcttccaaattctgggcagaaaaagcttcactctggcaggatgta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 gagttcatggcttctgcttccaaattctgggcagaaaaagcttcactctggcaggatgta 715
Query: 661 cagcatgagtcacttgaatcaatgtatagcgcgaaac-aatttgttgcaagaagggagtc 719
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 716 cagcatgagtcacttgaatcaatgtatagcgcgaaacaaatttgttgcaagaagggagtc 775
Query: 720 tccctggaaggtagatggtgattcagctggagtttcctctaaacttaaattactagaaca 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 tccctggaaggtagatggtgattcagctggagtttcctctaaacttaaattactagaaca 835
Query: 780 cgaattgttgaacctggagaaatttgctaagagtgatctatccaaggtggcacccttaat 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 cgaattgttgaacctggagaaatttgctaagagtgatctatccaaggtggcacccttaat 895
Query: 840 aaagaagcaggcaaagagatatcaagcactttcagaaaaaattgacgatttatgtagacg 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 896 aaagaagcaggcaaagagatatcaagcactttcagaaaaaattgacgatttatgtagacg 955
Query: 900 aatagccagtgatccctctgaaccctctctcagttcagaatttcgaacacaaactcaaac 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 956 aatagccagtgatccctctgaaccctctctcagttcagaatttcgaacacaaactcaaac 1015
Query: 960 agagtttttactggaagcatttcggcttcaacagggtgcatctgagactggccagaaact 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1016 agagtttttactggaagcatttcggcttcaacagggtgcatctgagactggccagaaact 1075
Query: 1020 aatggcactgcaaacagaaattgggaagagcctttatagggatgagttaaaaagtgaggc 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1076 aatggcactgcaaacagaaattgggaagagcctttatagggatgagttaaaaagtgaggc 1135
Query: 1080 cacgcctaccacaagacggtctctggactccataaggaacaacttcaaagatctccagcg 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1136 cacgcctaccacaagacggtctctggactccataaggaacaacttcaaagatctccagcg 1195
Query: 1140 aaatttggagatatggttggccagaatcattggcgatctcgaggggattctggcaaggga 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1196 aaatttggagatatggttggccagaatcattggcgatctcgaggggattctggcaaggga 1255
Query: 1200 tggcgcttctcgtgtaagagaatattatatttctaggtatccttttgttcaatag 1254
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1256 tggcgcttctcgtgtaagagaatattatatttctaggtatccttttgttcaatag 1310
>gnl|LJGI|BP057546 similar to UniRef100_A7QQ28 Cluster: Chromosome chr2 scaffold_140,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_140, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 533
Score = 613 bits (309), Expect = e-174
Identities = 309/309 (100%)
Strand = Plus / Minus
Query: 1 atggcaacagcagcagcagaccaagaacaacaagatgacgctcacctcctccgttcctac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 atggcaacagcagcagcagaccaagaacaacaagatgacgctcacctcctccgttcctac 250
Query: 61 attggcctcagcttctccgtcttcctcgccctactccccaccaacctccgcaccaaggcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 attggcctcagcttctccgtcttcctcgccctactccccaccaacctccgcaccaaggcg 190
Query: 121 cgtgacctcacgcgcgccgaggaggagctgtcccagatgcgctcccgccgccgggaggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 cgtgacctcacgcgcgccgaggaggagctgtcccagatgcgctcccgccgccgggaggat 130
Query: 181 tccaaggccaacgccagagtcgccgagatcttcgcctcccaccgcaacgcctggcgcgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 tccaaggccaacgccagagtcgccgagatcttcgcctcccaccgcaacgcctggcgcgac 70
Query: 241 gaggagaagcgcctgctacgccggatcgacgcggcgggggaggagatcgcgcgcctcagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 gaggagaagcgcctgctacgccggatcgacgcggcgggggaggagatcgcgcgcctcagg 10
Query: 301 gccgcggcg 309
|||||||||
Sbjct: 9 gccgcggcg 1