Miyakogusa Predicted Gene
- Lj2g3v1549630.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1549630.1 Non Chatacterized Hit- tr|I1L565|I1L565_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,85.69,0,seg,NULL; no
description,Tetratricopeptide-like helical; Tetratricopeptide
repeats,Tetratricopeptide,CUFF.37384.1
(2088 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79234 similar to UniRef100_A7P533 Cluster: Chromosome... 884 0.0
gnl|LJGI|BP057574 similar to UniRef100_A7P533 Cluster: Chromosom... 129 8e-29
>gnl|LJGI|TC79234 similar to UniRef100_A7P533 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (20%)
Length = 1070
Score = 884 bits (446), Expect = 0.0
Identities = 446/446 (100%)
Strand = Plus / Plus
Query: 1 atggagtcgagtgagtacgagagcgtgtcgattcgagaggtccatgcaaatggaagcagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atggagtcgagtgagtacgagagcgtgtcgattcgagaggtccatgcaaatggaagcagc 684
Query: 61 atggctgcatcagaagttgaggccaagcttgatgaaggaaatattcaagaggcggaatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atggctgcatcagaagttgaggccaagcttgatgaaggaaatattcaagaggcggaatcc 744
Query: 121 gcattgcgagaggggttatcactcaatttcgaggaagcaagagctcttcttgggaagttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gcattgcgagaggggttatcactcaatttcgaggaagcaagagctcttcttgggaagttg 804
Query: 181 gagtatcaaagaggtaatgtagaaggcgctcttcgtgtgtttgatgggattgatctccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gagtatcaaagaggtaatgtagaaggcgctcttcgtgtgtttgatgggattgatctccaa 864
Query: 241 gctgccatacagcgattgcagccctccttttctgaaaaatcaccggtcaagaaaggtcgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 gctgccatacagcgattgcagccctccttttctgaaaaatcaccggtcaagaaaggtcgc 924
Query: 301 actcgcactgaatcaccttcttcagtctctcagcatgctgccagtttggtgcttgaagcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 925 actcgcactgaatcaccttcttcagtctctcagcatgctgccagtttggtgcttgaagcc 984
Query: 361 atctacttaaaagccaagtctctacaaaaactggggaaattttctgaagcagctaatgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 985 atctacttaaaagccaagtctctacaaaaactggggaaattttctgaagcagctaatgat 1044
Query: 421 tgtaaacgcattcttgacgctgttga 446
||||||||||||||||||||||||||
Sbjct: 1045 tgtaaacgcattcttgacgctgttga 1070
>gnl|LJGI|BP057574 similar to UniRef100_A7P533 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (7%)
Length = 507
Score = 129 bits (65), Expect = 8e-29
Identities = 122/141 (86%)
Strand = Plus / Minus
Query: 1924 tctgatgcacttaggatagagcccacgaaccgcatggcttggtatcacttgggattggtt 1983
|||||||||||||| ||||| ||||| |||||||||||||||||| | ||||| || |
Sbjct: 506 tctgatgcacttagaatagaacccactaaccgcatggcttggtattatttggggttaact 447
Query: 1984 cacaagaatgatggccgaatgggtgatgctgctgattgcttccaagctgcttacatgctt 2043
|||||| |||||||||| |||| ||||||||||| |||||||| || ||||||||||||
Sbjct: 446 cacaaggctgatggccgagtgggcgatgctgctgactgcttccaggcagcttacatgctt 387
Query: 2044 gaagaatctgatccaattgaa 2064
|||||||| || || ||||||
Sbjct: 386 gaagaatcggagcccattgaa 366