Miyakogusa Predicted Gene
- Lj2g3v1549620.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1549620.1 tr|I3RZX6|I3RZX6_LOTJA ATP-dependent Clp protease
proteolytic subunit OS=Lotus japonicus PE=2 SV=1,98.83,0,ATP-DEPENDENT
CLP PROTEASE PROTEOLYTIC SUBUNIT,NULL; ATP-DEPENDENT CLP PROTEASE
PROTEOLYTIC SUBUNIT,,CUFF.37398.1
(513 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68135 similar to UniRef100_Q94B60 Cluster: ATP-depend... 1017 0.0
gnl|LJGI|AV409070 272 2e-72
>gnl|LJGI|TC68135 similar to UniRef100_Q94B60 Cluster: ATP-dependent Clp protease
proteolytic subunit 4, chloroplast precursor; n=1;
Arabidopsis thaliana|Rep: ATP-dependent Clp protease
proteolytic subunit 4, chloroplast precursor -
Arabidopsis thaliana (Mouse-ear cress), partial (80%)
Length = 1262
Score = 1017 bits (513), Expect = 0.0
Identities = 513/513 (100%)
Strand = Plus / Plus
Query: 1 atggatttgctcacaacctctccttcacacctttcatcttcgcttcccttctctccctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34 atggatttgctcacaacctctccttcacacctttcatcttcgcttcccttctctccctca 93
Query: 61 cgcattcgcacccttttctcaaagccacccacttcctctttcaaccctaaaccctcttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 cgcattcgcacccttttctcaaagccacccacttcctctttcaaccctaaaccctcttcc 153
Query: 121 ccttcaccatgtcaccgaacaaccccactcaagtgcatcctcaccgcttcaccaaaccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 ccttcaccatgtcaccgaacaaccccactcaagtgcatcctcaccgcttcaccaaaccac 213
Query: 181 tccaaaaacgcgaactttgagcccgaatctctgaaacccagaatcacttttcagatgtct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 tccaaaaacgcgaactttgagcccgaatctctgaaacccagaatcacttttcagatgtct 273
Query: 241 tcaccacagacgccggcaacggccatcagaggcgcggaaaccgatgccatggggttgttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tcaccacagacgccggcaacggccatcagaggcgcggaaaccgatgccatggggttgttg 333
Query: 301 ctgagggagagaatcgtgttcttgggaagcggtatcgatgactttgtggctgatgctatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ctgagggagagaatcgtgttcttgggaagcggtatcgatgactttgtggctgatgctatc 393
Query: 361 atgagtcagttgctgttattggatgctcaagacccctctaaagatatcaagcttttcatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 atgagtcagttgctgttattggatgctcaagacccctctaaagatatcaagcttttcatt 453
Query: 421 aattcccctggtggctctctcagcgccacgatggctatctatgacgctgtccagcttgtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 aattcccctggtggctctctcagcgccacgatggctatctatgacgctgtccagcttgtg 513
Query: 481 agggctgacgtttccacaatcgcacttggcatt 513
|||||||||||||||||||||||||||||||||
Sbjct: 514 agggctgacgtttccacaatcgcacttggcatt 546
>gnl|LJGI|AV409070
Length = 357
Score = 272 bits (137), Expect = 2e-72
Identities = 260/302 (86%), Gaps = 13/302 (4%)
Strand = Plus / Plus
Query: 1 atggatttgctcacaacctctccttcacacctttcatcttcgcttcccttctctccctc- 59
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct: 53 atggatttgctcacaacctctcctacacacctttcatcttcgcttcccttctctccttct 112
Query: 60 -----------acgcattcgcacccttttctcaaagccacccacttcctctttcaaccct 108
||||||| || |||||||||||||||||||||||||||| ||||||||
Sbjct: 113 ccctctcccgcacgcattagcgcccttttctcaaagccacccacttcctcattcaaccca 172
Query: 109 aaaccctcttccccttcaccatgtcaccgaacaaccccactcaagtgcatcctcaccgct 168
||| || |||||||||||||||||||| |||||| |||||||| |||| ||||||||||
Sbjct: 173 aaatccccttccccttcaccatgtcactgaacaatcccactcaggtgcgtcctcaccgcg 232
Query: 169 tcaccaaaccactccaaaaacgcgaactttgagcccgaatctctgaaacccagaatcact 228
|||||||| |||||||||||||| |||||||| | ||||||| |||||||| ||||| |
Sbjct: 233 tcaccaaaacactccaaaaacgcagactttgagtctgaatctcagaaacccataatcatt 292
Query: 229 tttcagatgtcttcaccacagacgccggcaacggccatcagaggcgcggaaaccgatgcc 288
||||| || |||||||| || |||||||| |||||||| |||||| | |||||||||||
Sbjct: 293 tttcaaatatcttcacc-catacgccggccacggccatgagaggcccaaaaaccgatgcc 351
Query: 289 at 290
||
Sbjct: 352 at 353