Miyakogusa Predicted Gene

Lj2g3v1549590.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1549590.1 tr|D7MPV6|D7MPV6_ARALL Predicted protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_683248
PE,36.59,0.000000000002,seg,NULL,CUFF.37382.1
         (909 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW595913 similar to UniRef100_A7QQ40 Cluster: Chromosom...   589   e-167

>gnl|LJGI|BW595913 similar to UniRef100_A7QQ40 Cluster: Chromosome chr2 scaffold_140,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_140, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (26%)
          Length = 487

 Score =  589 bits (297), Expect = e-167
 Identities = 300/301 (99%)
 Strand = Plus / Plus

                                                                       
Query: 509 aagtgcatttatatcaagataatcttttcggttgccatgctgatgagcagtctactattg 568
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 aagtgcatttatatcaagataatcttttcggttgccatgctgatgagcagtctactattg 246

                                                                       
Query: 569 agaagattaaacaaaaggctatcatggccatggagatggtaaattcctggttttccgata 628
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 agaagattaaacaaaagtctatcatggccatggagatggtaaattcctggttttccgata 306

                                                                       
Query: 629 agcgaaggaccaacaattggaggtggggagctatagctggattagtaactgggttctcaa 688
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 agcgaaggaccaacaattggaggtggggagctatagctggattagtaactgggttctcaa 366

                                                                       
Query: 689 cttctttgatctctataacctttatcgggtttttacaacaattgctatcttcagtttatc 748
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 cttctttgatctctataacctttatcgggtttttacaacaattgctatcttcagtttatc 426

                                                                       
Query: 749 aatcttttaaaacatgggtatttccacggcgcgtcaatgctgttctcatcaggcgcgctt 808
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 aatcttttaaaacatgggtatttccacggcgcgtcaatgctgttctcatcaggcgcgctt 486

            
Query: 809 g 809
           |
Sbjct: 487 g 487



 Score =  359 bits (181), Expect = 2e-98
 Identities = 181/181 (100%)
 Strand = Plus / Plus

                                                                       
Query: 285 tgagagaagcaagtttcgctgccgttatgattactactgggcttcagtattcaaggtgga 344
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   tgagagaagcaagtttcgctgccgttatgattactactgggcttcagtattcaaggtgga 68

                                                                       
Query: 345 atatgtagatcgtttttcaggtcagacacaagttgcatttgcagaggctccaaaagaggc 404
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  atatgtagatcgtttttcaggtcagacacaagttgcatttgcagaggctccaaaagaggc 128

                                                                       
Query: 405 tcttcctccttattgcaggcctaattttggtgctgcatggttgacacaatacaaatataa 464
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 tcttcctccttattgcaggcctaattttggtgctgcatggttgacacaatacaaatataa 188

            
Query: 465 g 465
           |
Sbjct: 189 g 189