Miyakogusa Predicted Gene
- Lj2g3v1548470.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1548470.1 tr|A9TFZ6|A9TFZ6_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,45.22,2e-18,no description,Nucleic acid-binding, OB-fold;
seg,NULL; Rep-A_N,Replication factor-A protein 1, N-te,CUFF.37375.1
(1089 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58691 weakly similar to UniRef100_Q92372 Cluster: Rep... 1251 0.0
>gnl|LJGI|TC58691 weakly similar to UniRef100_Q92372 Cluster: Replication factor-A
protein 1; n=1; Schizosaccharomyces pombe|Rep:
Replication factor-A protein 1 - Schizosaccharomyces
pombe (Fission yeast), partial (7%)
Length = 823
Score = 1251 bits (631), Expect = 0.0
Identities = 637/639 (99%)
Strand = Plus / Plus
Query: 1 atggctgtgaatctgactgaaggtgcgataatggctatgtgcactgacggtgtcacttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 atggctgtgaatctgactgaaggtgcgataatggctatgtgcactgacggtgtcacttcc 232
Query: 61 gaccaattgcaaccggtgctgcaaattatcgacttgaagcacgtgcagacgcagcagaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 gaccaattgcaaccggtgctgcaaattatcgacttgaagcacgtgcagacgcagcagaac 292
Query: 121 aacgccactaagcgctatcgcgttgtcgtctccgacggttttctctaccagcaagggatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 aacgccactaagcgctatcgcgttgtcgtctccgacggttttctctaccagcaagggatg 352
Query: 181 ctcgccactcagaggaacgagttggttgattctggaaagttgcaaaaaggctccattgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ctcgccactcagaggaacgagttggttgattctggaaagttgcaaaaaggctccattgtt 412
Query: 241 aggctcactcagttcgcgtgtaaccatgtcggggatcgcatgattattatcatcattgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 aggctcactcagttcgcgtgtaaccatgtcggggatcgcatgattattatcatcattgat 472
Query: 301 ctagagattataatggacaaatgtgacctgattggagagcctaagccagcacccagaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 ctagagattataatggacaaatgtgacctgattggagagcctaagccagcacccagaaat 532
Query: 361 ggggcgcgcgcacaatctgctaccggtcaatcaggagttacctctgggaactcgcagcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 ggggcgcgcgcacaatctgctaccggtcaatcaggagttacctctgggaactcgcagcct 592
Query: 421 ttcaataatagtgcaaatgcaggtggcgtgactgctcggacaagtcctgttgggccttct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 ttcaataatagtgcaaatgcaggtggcgtgactgctcggacaagtcctgttgggccttct 652
Query: 481 ctggatcatccgaaagtgaaccctcctgctactaatgtttattctagcagttctgaccct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 ctggatcatccgaaagtgaaccctcctgctactaatgtttattctagcagttctgaccct 712
Query: 541 gcaagatttggtgcatctaatgccactgctgctgctagcagtgtttattctagcagttct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 gcaagatttggtgcatctaatgccactgctgctgctagcagtgtttattctagcagttct 772
Query: 601 gactctgcaagatttggtgcatctaatgcccctcctgct 639
|||||||||||||||||||||||||||||| || |||||
Sbjct: 773 gactctgcaagatttggtgcatctaatgccactgctgct 811
Score = 115 bits (58), Expect = 6e-25
Identities = 68/70 (97%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 516 tgtttattctagcagttctgaccctgcaagatttggtgcatctaatgccactgctgctg- 574
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 754 tgtttattctagcagttctgactctgcaagatttggtgcatctaatgccactgctgctgc 813
Query: 575 ctagcagtgt 584
||||||||||
Sbjct: 814 ctagcagtgt 823