Miyakogusa Predicted Gene
- Lj2g3v1536140.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1536140.1 Non Chatacterized Hit- tr|I1J4L9|I1J4L9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55019
PE,82.68,0,HELICASE_ATP_BIND_1,Helicase, superfamily 1/2, ATP-binding
domain; HELICASE_CTER,Helicase, C-termina,CUFF.37369.1
(1611 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64040 similar to UniRef100_A7QQZ1 Cluster: Chromosome... 1233 0.0
gnl|LJGI|TC70007 similar to UniRef100_A7QQZ1 Cluster: Chromosome... 724 0.0
gnl|LJGI|TC76587 similar to UniRef100_Q9C551 Cluster: DEAD-box A... 601 e-171
gnl|LJGI|BW598848 weakly similar to UniRef100_Q6YS30 Cluster: DE... 398 e-110
>gnl|LJGI|TC64040 similar to UniRef100_A7QQZ1 Cluster: Chromosome undetermined
scaffold_146, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_146,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (40%)
Length = 1224
Score = 1233 bits (622), Expect = 0.0
Identities = 622/622 (100%)
Strand = Plus / Plus
Query: 262 ggtaacggtaacgccgatgaaacggttgcggacggggccgtggtggttacagggaaggat 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ggtaacggtaacgccgatgaaacggttgcggacggggccgtggtggttacagggaaggat 396
Query: 322 gctgccgacgcgaagtacgcggcggtgaaaaccttcaaggattcggggctgccggagaat 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 gctgccgacgcgaagtacgcggcggtgaaaaccttcaaggattcggggctgccggagaat 456
Query: 382 gtgatggagtgctgcaaggggtttgagaagccttctccgattcaatcacgagcgtggcct 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gtgatggagtgctgcaaggggtttgagaagccttctccgattcaatcacgagcgtggcct 516
Query: 442 tttttgttagacggtcgcgatctgattggaattgcagccactggctcagggaagaccttg 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 tttttgttagacggtcgcgatctgattggaattgcagccactggctcagggaagaccttg 576
Query: 502 gcgtttggaataccggggattatgcatgttctgggcaagcggaagaataaagcttccagg 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 gcgtttggaataccggggattatgcatgttctgggcaagcggaagaataaagcttccagg 636
Query: 562 ggtcggagtcctctttgccttgttctctctcccacaagggagctagctcagcaaatatca 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 ggtcggagtcctctttgccttgttctctctcccacaagggagctagctcagcaaatatca 696
Query: 622 gatgtaatgtgtgatgctggtagaacttgtggtgtggattctatatgtttgtatggtgga 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 gatgtaatgtgtgatgctggtagaacttgtggtgtggattctatatgtttgtatggtgga 756
Query: 682 acatccaaaggaccacaaatctctgcactaaaatctggtgttgacattgtcattggaact 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 acatccaaaggaccacaaatctctgcactaaaatctggtgttgacattgtcattggaact 816
Query: 742 cctggccgaatccaggatttgattgaaatgggtatcttgagcctgaaagaagtatcttat 801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 cctggccgaatccaggatttgattgaaatgggtatcttgagcctgaaagaagtatcttat 876
Query: 802 gtggtccttgatgaagcagatcggatgcttgacatgggttttgaacaaatagttcgctct 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 gtggtccttgatgaagcagatcggatgcttgacatgggttttgaacaaatagttcgctct 936
Query: 862 atacttgggcagacatgttctg 883
||||||||||||||||||||||
Sbjct: 937 atacttgggcagacatgttctg 958
Score = 157 bits (79), Expect = 3e-37
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 atgggtcgcaaacacgacgccgttgcggccagcgaaccagtcgccgatgaagctcccaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 atgggtcgcaaacacgacgccgttgcggccagcgaaccagtcgccgatgaagctcccaac 135
Query: 61 agccccgaactccaatccg 79
|||||||||||||||||||
Sbjct: 136 agccccgaactccaatccg 154
Score = 139 bits (70), Expect = 6e-32
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 883 gttcgtcaaatgattatgttcagtgctacatggcctttagcagttcatcacttagcacag 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1155 gttcgtcaaatgattatgttcagtgctacatggcctttagcagttcatcacttagcacag 1214
Query: 943 gagtttatgg 952
||||||||||
Sbjct: 1215 gagtttatgg 1224
Score = 73.8 bits (37), Expect = 3e-12
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 148 ctcgaggaactcgacaatcaaaacggcaccgaatcgg 184
|||||||||||||||||||||||||||||||||||||
Sbjct: 223 ctcgaggaactcgacaatcaaaacggcaccgaatcgg 259
>gnl|LJGI|TC70007 similar to UniRef100_A7QQZ1 Cluster: Chromosome undetermined
scaffold_146, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_146,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (21%)
Length = 763
Score = 724 bits (365), Expect = 0.0
Identities = 365/365 (100%)
Strand = Plus / Plus
Query: 262 ggtaacggtaacgccgatgaaacggttgcggacggggccgtggtggttacagggaaggat 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ggtaacggtaacgccgatgaaacggttgcggacggggccgtggtggttacagggaaggat 458
Query: 322 gctgccgacgcgaagtacgcggcggtgaaaaccttcaaggattcggggctgccggagaat 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gctgccgacgcgaagtacgcggcggtgaaaaccttcaaggattcggggctgccggagaat 518
Query: 382 gtgatggagtgctgcaaggggtttgagaagccttctccgattcaatcacgagcgtggcct 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gtgatggagtgctgcaaggggtttgagaagccttctccgattcaatcacgagcgtggcct 578
Query: 442 tttttgttagacggtcgcgatctgattggaattgcagccactggctcagggaagaccttg 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 tttttgttagacggtcgcgatctgattggaattgcagccactggctcagggaagaccttg 638
Query: 502 gcgtttggaataccggggattatgcatgttctgggcaagcggaagaataaagcttccagg 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 gcgtttggaataccggggattatgcatgttctgggcaagcggaagaataaagcttccagg 698
Query: 562 ggtcggagtcctctttgccttgttctctctcccacaagggagctagctcagcaaatatca 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 ggtcggagtcctctttgccttgttctctctcccacaagggagctagctcagcaaatatca 758
Query: 622 gatgt 626
|||||
Sbjct: 759 gatgt 763
Score = 157 bits (79), Expect = 3e-37
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 1 atgggtcgcaaacacgacgccgttgcggccagcgaaccagtcgccgatgaagctcccaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 atgggtcgcaaacacgacgccgttgcggccagcgaaccagtcgccgatgaagctcccaac 197
Query: 61 agccccgaactccaatccg 79
|||||||||||||||||||
Sbjct: 198 agccccgaactccaatccg 216
Score = 73.8 bits (37), Expect = 3e-12
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 148 ctcgaggaactcgacaatcaaaacggcaccgaatcgg 184
|||||||||||||||||||||||||||||||||||||
Sbjct: 285 ctcgaggaactcgacaatcaaaacggcaccgaatcgg 321
>gnl|LJGI|TC76587 similar to UniRef100_Q9C551 Cluster: DEAD-box ATP-dependent RNA
helicase 5; n=1; Arabidopsis thaliana|Rep: DEAD-box
ATP-dependent RNA helicase 5 - Arabidopsis thaliana
(Mouse-ear cress), partial (19%)
Length = 554
Score = 601 bits (303), Expect = e-171
Identities = 303/303 (100%)
Strand = Plus / Plus
Query: 1309 gtgatcaactatagttttccactaactacagaggattatgttcatagaattgggcgcact 1368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgatcaactatagttttccactaactacagaggattatgttcatagaattgggcgcact 60
Query: 1369 gggcgagctggtaaaaaaggtgttgcccatacattcttcacgcagcagaataagggactt 1428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gggcgagctggtaaaaaaggtgttgcccatacattcttcacgcagcagaataagggactt 120
Query: 1429 gctggggagctcgtgaatgttttaagagaagcaaatcaagttgtgccagacgatctcttg 1488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gctggggagctcgtgaatgttttaagagaagcaaatcaagttgtgccagacgatctcttg 180
Query: 1489 aaatttgggacacatgtaaagaaaaaggagtccaagctttatggggctcacttcaaggaa 1548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaatttgggacacatgtaaagaaaaaggagtccaagctttatggggctcacttcaaggaa 240
Query: 1549 attcctgttgatgctatgaagtctcaaaaaataaagtttgccgactcagacgatgaagac 1608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 attcctgttgatgctatgaagtctcaaaaaataaagtttgccgactcagacgatgaagac 300
Query: 1609 taa 1611
|||
Sbjct: 301 taa 303
>gnl|LJGI|BW598848 weakly similar to UniRef100_Q6YS30 Cluster: DEAD-box ATP-dependent
RNA helicase 5; n=1; Oryza sativa Japonica Group|Rep:
DEAD-box ATP-dependent RNA helicase 5 - Oryza sativa
subsp. japonica (Rice), partial (17%)
Length = 477
Score = 398 bits (201), Expect = e-110
Identities = 342/389 (87%)
Strand = Plus / Plus
Query: 943 gagtttatggatcctaaccctataaaagttgtcgtaggttccgaagatttagctgccaat 1002
||||| |||||||||||||||| |||||||||| || | ||| || |||| ||||||||
Sbjct: 89 gagttgatggatcctaaccctagaaaagttgtcttaagctcccaaaatttctctgccaat 148
Query: 1003 catgatgtcatgcagatagtcgaggttttggatgaccgcgcacgtgacaagcgtctgttt 1062
||||| |||| ||| |||||| |||||||||| |||| | |||||| || || ||||
Sbjct: 149 catgaggtcaggcaaatagtctaggttttggaggacctcccacgtgcacggcttcggttt 208
Query: 1063 actttacttgaaaaataccacaaatctcagagaaatcgagtattggtttttgctttatac 1122
|||||||||||||| |||| ||||||||| |||| || |||||||||| |||| ||||
Sbjct: 209 actttacttgaaaattaccgcaaatctcaaagaactctgatattggttttcgcttgatac 268
Query: 1123 aaaaaggaaaccgcacgagttgaaagtatgcttcaacaagggggctggaaggctgtgtcg 1182
| |||| ||||| ||| |||||||||||||||| | |||||||||||| ||||||||
Sbjct: 269 catcaggagaccgctcgacttgaaagtatgcttcatccagggggctggaatgctgtgtct 328
Query: 1183 atacatggggacaaatcacaacatgaacgcacaaaggcactgtctttattcaagaacgga 1242
|| | |||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 329 attcttggggacagttcacaacatgaacgcacaaaggcactgtcttggttcaagaacgga 388
Query: 1243 agctgccctttgatgattgcgactgatgtggctgcacggggattggatattccagatgtt 1302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 agctgccctttgatgattgcgactgatgtggctgcacggggattggatattccagatgtt 448
Query: 1303 gaagtagtgatcaactatagttttccact 1331
|||||||||||||||||||||||||||||
Sbjct: 449 gaagtagtgatcaactatagttttccact 477