Miyakogusa Predicted Gene

Lj2g3v1533030.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1533030.1 Non Chatacterized Hit- tr|D8RP38|D8RP38_SELML
Putative uncharacterized protein OS=Selaginella
moelle,39.6,3e-19,seg,NULL,CUFF.37339.1
         (450 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80809 similar to UniRef100_A7PBY6 Cluster: Chromosome...   876   0.0  
gnl|LJGI|AV781255 similar to UniRef100_A7PBY6 Cluster: Chromosom...   131   4e-30
gnl|LJGI|BP063233 similar to UniRef100_A7PBY6 Cluster: Chromosom...    92   3e-18

>gnl|LJGI|TC80809 similar to UniRef100_A7PBY6 Cluster: Chromosome chr2 scaffold_11,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_11, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (91%)
          Length = 821

 Score =  876 bits (442), Expect = 0.0
 Identities = 449/450 (99%), Gaps = 1/450 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggtgggtttattctccagattttctgttggaagaagcacccaccgacgtacgcaaagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 atggtgggtttattctccagattttctgttggaagaagcacccaccgacgtacgcaaagt 361

                                                                       
Query: 61  gccatcgatgagagggaagtaatgcccccaaacttggagactgccgctgcggcgagtgct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gccatcgatgagagggaagtaatgcccccaaacttggagactgccgctgcggcgagtgct 421

                                                                       
Query: 121 gctactgctgtttctcatggaattgaagtggcagtggagtttaagccagttgagcaccca 180
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gctactgctgtttctcatg-aattgaagtggcagtggagtttaagccagttgagcaccca 480

                                                                       
Query: 181 gttgaaccccttgacaatgatagcccaattcagtgcccgttaccagaaccgtctattctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gttgaaccccttgacaatgatagcccaattcagtgcccgttaccagaaccgtctattctt 540

                                                                       
Query: 241 aatgatggaagaatatggaaagagcgagtatctgctactgtccgtagaagaggtgacctg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aatgatggaagaatatggaaagagcgagtatctgctactgtccgtagaagaggtgacctg 600

                                                                       
Query: 301 ccagtgatgaaggaagggggaacccttgaatctgagggtgctgtgagaaagccacgaacc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ccagtgatgaaggaagggggaacccttgaatctgagggtgctgtgagaaagccacgaacc 660

                                                                       
Query: 361 cagtctaatcgaatgatcctaccatctcttagtgctcccgagcataatcttctaaaactt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cagtctaatcgaatgatcctaccatctcttagtgctcccgagcataatcttctaaaactt 720

                                         
Query: 421 cttgaagagtgtcatgcctcaggcatgtaa 450
           ||||||||||||||||||||||||||||||
Sbjct: 721 cttgaagagtgtcatgcctcaggcatgtaa 750


>gnl|LJGI|AV781255 similar to UniRef100_A7PBY6 Cluster: Chromosome chr2 scaffold_11,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_11, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (17%)
          Length = 483

 Score =  131 bits (66), Expect = 4e-30
 Identities = 84/90 (93%)
 Strand = Plus / Minus

                                                                       
Query: 343 gtgagaaagccacgaacccagtctaatcgaatgatcctaccatctcttagtgctcccgag 402
           |||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||| 
Sbjct: 483 gtgagaaagctacggacccagtctcatcgaatgatcctaccatctcttagtgctcccgac 424

                                         
Query: 403 cataatcttctaaaacttcttgaagagtgt 432
           |||||||||||  |||||||||||||||||
Sbjct: 423 cataatcttctttaacttcttgaagagtgt 394


>gnl|LJGI|BP063233 similar to UniRef100_A7PBY6 Cluster: Chromosome chr2 scaffold_11,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_11, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (14%)
          Length = 493

 Score = 91.7 bits (46), Expect = 3e-18
 Identities = 55/58 (94%)
 Strand = Plus / Minus

                                                                     
Query: 383 catctcttagtgctcccgagcataatcttctaaaacttcttgaagagtgtcatgcctc 440
           ||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||
Sbjct: 493 catctcttagtgctccccaccataatcttctaaaacttcttgaagagtgtaatgcctc 436