Miyakogusa Predicted Gene
- Lj2g3v1510870.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1510870.1 Non Chatacterized Hit- tr|A5BLG5|A5BLG5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,26.83,5e-18,PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING
PROTEIN,NULL; FAMILY NOT NAMED,NULL; PPR:
pentatricopeptid,CUFF.37323.1
(1818 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO028911 similar to UniRef100_A7PBZ3 Cluster: Chromosom... 1651 0.0
gnl|LJGI|GO022875 similar to UniRef100_A7PBZ3 Cluster: Chromosom... 529 e-149
>gnl|LJGI|GO028911 similar to UniRef100_A7PBZ3 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (45%)
Length = 930
Score = 1651 bits (833), Expect = 0.0
Identities = 911/929 (98%), Gaps = 6/929 (0%)
Strand = Plus / Minus
Query: 883 gctgagaagagtagattctcttacactgttatgatctcagggctttccattcatggtcac 942
|||||||||| |||| |||| ||||||| ||||||||||||||| ||||||||| ||||
Sbjct: 923 gctgagaagaatagaaactct-acactgt-atgatctcagggcttgccattcatg-tcac 867
Query: 943 ggcgccgaagctcttcaagttttctcagaaattctggaagaaggtttggcaccggatgat 1002
||| | |||||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 866 ggcac-gaagctcttcaagttt-ctcagaaatgctggaagaaggtttggcaccggatgat 809
Query: 1003 gtggtctatgtaggtgtgttaagtgcttgcagtcatgctggtcttgtcaatgagggcctg 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 gtggtctatgtaggtgtgttaagtgcttgcagtcatgctggtcttgtcaatgagggcctg 749
Query: 1063 caatgtttcaaaaacatgcaatttgagcacaagatcaaaccaacagttcagcactatggt 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 caatgtttcaaaaacatgcaatttgagcacaagatcaaaccaacagttcagcactatggt 689
Query: 1123 tgcatggtggatcttttgggaagagctgggatgctcagggaagcctatggcctcataaag 1182
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 tgcatggtg-atcttttgggaagagctgggatgctcagggaagcctatggcctcataaag 630
Query: 1183 agcatgccaattaagcctaatgatgtggtttggaggagccttcttagtgcttgtaaggtt 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 agcatgccaattaagcctaatgatgtggtttggaggagccttcttagtgcttgtaaggtt 570
Query: 1243 catctgaacttggaaataggggaaattgcagctgaaaaacttttcatgcttaatccaaac 1302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 catctgaacttggaaataggggaaattgcagctgaaaaacttttcatgcttaatccaaac 510
Query: 1303 aaccctggtgactatttggtgctagcaaatatgtatgcaagagctcataagtggaatgat 1362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 aaccctggtgactatttggtgctagcaaatatgtatgcaagagctcataagtggaatgat 450
Query: 1363 gtggccagaatcagaagagaaatggctgataaacacttggtacaaacacctgggtttagc 1422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gtggccagaatcagaagagaaatggctgataaacacttggtacaaacacctgggtttagc 390
Query: 1423 atggttgaagcagagaggaaggtctacaagtttgtatcgcaagacaggtctcaacccgaa 1482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 atggttgaagcagagaggaaggtctacaagtttgtatcgcaagacaggtctcaacccgaa 330
Query: 1483 tttgacaccatctacaatatgattcaccaaatggaatggcagttggaatttgaaggctat 1542
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 329 tttgacaccatctacaatatgattcaccaaatggaatggcagttgaaatttgaaggctat 270
Query: 1543 aaaccagatacatcacaggtgctgctagatgtagatgaagacgaaaagagggagaggctg 1602
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 269 aaaccagatacatcacaggtgctactagatgtagatgaagaagaaaagagggagaggctg 210
Query: 1603 aaacatcatagtcagaagctagcaattgcttttacactgatacatacatctgagggatct 1662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 aaacatcatagtcagaagctagcaattgcttttacactgatacatacatctgagggatct 150
Query: 1663 cctatgagaatatcaagaaatcttaggttgtgtagtgattgtcatacatacactaaattc 1722
||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 149 cctataagaatatcaagaaatcttaggatgtgtagcgattgtcatacatacactaaattc 90
Query: 1723 atttccaagatctgtgaacgagagattactgtaagagaccgttttcggttccaccatttt 1782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 atttccaagatctgtgaacgagagattactgtaagagaccgttttcggttccaccatttt 30
Query: 1783 aaagatggagcttgctcatgtaaagatta 1811
|||||||||||||||||||||||||||||
Sbjct: 29 aaagatggagcttgctcatgtaaagatta 1
>gnl|LJGI|GO022875 similar to UniRef100_A7PBZ3 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 765
Score = 529 bits (267), Expect = e-149
Identities = 304/316 (96%), Gaps = 2/316 (0%)
Strand = Plus / Plus
Query: 1 atgacaaggacaactgtccttagccaaacccatcttttgtcactaccaagtactccaccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 atgacaaggacaactgtccttagccaaacccatcttttgtcactaccaagtactccaccc 453
Query: 61 cagtgctctgagttgagtaccaggttcaatgagcagggatggtatcctttgttgaagaga 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cagtgctctgagttgagcaccaggttcaatgagcagggatggtatcctttgttgaagaga 513
Query: 121 tgcaagagcatggaagagtttaagcaagttcatgcccatgttctgaaattgggcnnnnnn 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 tgcaagagcatggaagagtttaagcaagttcatgcccatgttctgaaattgggctttttt 573
Query: 181 ngtgattctttttgtgggagcaatcttgttgccacttgtgctctagcaaaatggggcagc 240
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 574 tgtgattctttttgtgggagcaatcttgttgccacttgtgctctggcaaaatggggcagc 633
Query: 241 atggagtatgcttgttcaatcttcaggcagattgaggaacctggtagttttgagtacaac 300
||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 634 atggagtatgcttgttcgatcttca-gcagattga-gaacctggtagttttgagtacaac 691
Query: 301 accatgattagaggga 316
||||||||||||||||
Sbjct: 692 accatgattagaggga 707