Miyakogusa Predicted Gene

Lj2g3v1510860.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1510860.2 Non Chatacterized Hit- tr|I3T658|I3T658_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.36,0,no
description,ESCRT-II complex, Vps25 subunit, N-terminal winged helix;
no description,ESCRT-II com,CUFF.37324.2
         (471 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64707 similar to UniRef100_A7PBZ6 Cluster: Chromosome...   934   0.0  

>gnl|LJGI|TC64707 similar to UniRef100_A7PBZ6 Cluster: Chromosome chr2 scaffold_11,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_11, whole genome shotgun
           sequence - Vitis vinifera (Grape), complete
          Length = 968

 Score =  934 bits (471), Expect = 0.0
 Identities = 471/471 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcagaaattgggagacttcaaactaccgcatttcttcaattacccaccttacttcact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 atgcagaaattgggagacttcaaactaccgcatttcttcaattacccaccttacttcact 203

                                                                       
Query: 61  ttgcagccagtaagagacactagagagaagcagatacagctttggaaagagcttatttta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ttgcagccagtaagagacactagagagaagcagatacagctttggaaagagcttatttta 263

                                                                       
Query: 121 gattactgcaaaacacagaagttatttgtaattgggcttgaagaagagtttcctctgttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gattactgcaaaacacagaagttatttgtaattgggcttgaagaagagtttcctctgttt 323

                                                                       
Query: 181 acaaatcctgtaattgaaaggtctcttactcatgaagccagagaagcgtttgtttcagcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acaaatcctgtaattgaaaggtctcttactcatgaagccagagaagcgtttgtttcagcc 383

                                                                       
Query: 241 ttagtttcagaaggacgtgcagaatggatggataaaggacataggaaatgtctcgttctc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttagtttcagaaggacgtgcagaatggatggataaaggacataggaaatgtctcgttctc 443

                                                                       
Query: 301 tggcatcggattcaagattgggctgaaattttattacagtttgcgaaagataatggactc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tggcatcggattcaagattgggctgaaattttattacagtttgcgaaagataatggactc 503

                                                                       
Query: 361 gaggacagtgttgtgacaatagaagaaatacgctttgggactgaatctcaaggaacagag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gaggacagtgttgtgacaatagaagaaatacgctttgggactgaatctcaaggaacagag 563

                                                              
Query: 421 cttcatgggatcgaccgaactattctgaatcgggcattgaaactattagaa 471
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cttcatgggatcgaccgaactattctgaatcgggcattgaaactattagaa 614