Miyakogusa Predicted Gene

Lj2g3v1510850.2
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1510850.2 tr|G7JC33|G7JC33_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_3g0,26.39,2e-18,PPR,Pentatricopeptide repeat; PENTATRICOPEPTIDE
(PPR) REPEAT-CONTAINING PROTEIN,NULL; FAMILY NOT NAM,CUFF.37322.2
         (1233 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS332255 similar to UniRef100_A7R496 Cluster: Chromosom...  1122   0.0  

>gnl|LJGI|FS332255 similar to UniRef100_A7R496 Cluster: Chromosome undetermined
           scaffold_635, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_635,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (3%)
          Length = 600

 Score = 1122 bits (566), Expect = 0.0
 Identities = 573/574 (99%), Gaps = 1/574 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcagctctcagctgcaatcagcgacgtcttggcggtgcttccgccttctgggtcgctc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28  atgcagctctcagctgcaatcagcgacgtcttggcggtgcttccgccttctgggtcgctc 87

                                                                       
Query: 61  cggctaccggacctccgccacctgcatgctttccctgtttctgatgccaaaaattttctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88  cggctaccggacctccgccacctgcatgctttccctgtttctgatgccaaaaattttctt 147

                                                                       
Query: 121 tgccgccaattttttattaaaaaattctctggtaaaacatttgaaaatgattgcattaca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 tgccgccaattttttattaaaaaattctctggtaaaacatttgaaaatgattgcattaca 207

                                                                       
Query: 181 aagcattctaaaaatgcaagtaccgaccgagcactagatttgctgaccggaatgaataga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 aagcattctaaaaatgcaagtaccgaccgagcactagatttgctgaccggaatgaataga 267

                                                                       
Query: 241 ttgacggcgaagccatcgaaatctgttctttgtactgcgcttagttcttgcgcgaaagcc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ttgacggcgaagccatcgaaatctgttctttgtactgcgcttagttcttgcgcgaaagcc 327

                                                                       
Query: 301 cggaattggcacttgggtctacaaatccatgcctatttggttcgatccggatatgaagat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 cggaattggcacttgggtctacaaatccatgcctatttggttcgatccggatatgaagat 387

                                                                       
Query: 361 aatttgttccttagtagcgcgcttgttgatttctatgcaaaatgttttgccattgtggat 420
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 aa-ttgttccttagtagcgcgcttgttgatttctatgcaaaatgttttgccattgtggat 446

                                                                       
Query: 421 gctaggaaggtatttcgtgccatgaaagtacatgatcaggtgtcgtggacttcgcttatt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gctaggaaggtatttcgtgccatgaaagtacatgatcaggtgtcgtggacttcgcttatt 506

                                                                       
Query: 481 gctggattctcagcaaacggacaagggagagatgctttcttgttgttcaaagagatgtta 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gctggattctcagcaaacggacaagggagagatgctttcttgttgttcaaagagatgtta 566

                                             
Query: 541 ggcacccacattaagcccaattgttttaccttga 574
           ||||||||||||||||||||||||||||||||||
Sbjct: 567 ggcacccacattaagcccaattgttttaccttga 600