Miyakogusa Predicted Gene

Lj2g3v1509550.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1509550.1 Non Chatacterized Hit- tr|I1J4R3|I1J4R3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42497 PE,83.57,0,no
description,Homeodomain-like; Bet v1-like,NULL;
Homeodomain-like,Homeodomain-like; HOMEOBOX_1,Hom,CUFF.37303.1
         (2331 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70125 similar to UniRef100_A7PC25 Cluster: Chromosome...   833   0.0  
gnl|LJGI|TC75175 homologue to UniRef100_A7PXH2 Cluster: Chromoso...    76   1e-12
gnl|LJGI|TC71926 homologue to UniRef100_A7PXZ1 Cluster: Chromoso...    58   3e-07

>gnl|LJGI|TC70125 similar to UniRef100_A7PC25 Cluster: Chromosome chr2 scaffold_11,
           whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_11, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (12%)
          Length = 585

 Score =  833 bits (420), Expect = 0.0
 Identities = 420/420 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtatggggattgccaagtcatgtcagatactctcttctcgtcaccgatccagaaccct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 atgtatggggattgccaagtcatgtcagatactctcttctcgtcaccgatccagaaccct 225

                                                                       
Query: 61  aacttcaacttcatctccaccatgccttttcacccttttcctcccatgaaagaagaagat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 aacttcaacttcatctccaccatgccttttcacccttttcctcccatgaaagaagaagat 285

                                                                       
Query: 121 tctatgttgggagggaaagaagagatggaaagtggttctgaaagtgaacaagttgaagac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 tctatgttgggagggaaagaagagatggaaagtggttctgaaagtgaacaagttgaagac 345

                                                                       
Query: 181 aagtccgggaacgagcaagagatcactgaacagcctaagaaaaaacgttatcacaggcac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 aagtccgggaacgagcaagagatcactgaacagcctaagaaaaaacgttatcacaggcac 405

                                                                       
Query: 241 actgctcgccagatccaagaaatggaagctttgttcaaggaatgtccacacccggatgat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 actgctcgccagatccaagaaatggaagctttgttcaaggaatgtccacacccggatgat 465

                                                                       
Query: 301 aagcaaaggatgaaactaagccatgatctaggcctaaaaccacgccaggtcaagttctgg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 aagcaaaggatgaaactaagccatgatctaggcctaaaaccacgccaggtcaagttctgg 525

                                                                       
Query: 361 ttccaaaaccgccgaacccagatgaaggcacagcaagatcgatcagataatgtgatactt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ttccaaaaccgccgaacccagatgaaggcacagcaagatcgatcagataatgtgatactt 585


>gnl|LJGI|TC75175 homologue to UniRef100_A7PXH2 Cluster: Chromosome chr12
           scaffold_36, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr12 scaffold_36, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (20%)
          Length = 831

 Score = 75.8 bits (38), Expect = 1e-12
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                       
Query: 249 ccagatccaagaaatggaagctttgttcaaggaatgtccacacccggatgataagcaaag 308
           ||||||||| |||||||||||||| |||||||| ||||| ||||| ||||| ||||||||
Sbjct: 480 ccagatccaggaaatggaagcttttttcaaggagtgtcctcacccagatgacaagcaaag 539

             
Query: 309 ga 310
           ||
Sbjct: 540 ga 541


>gnl|LJGI|TC71926 homologue to UniRef100_A7PXZ1 Cluster: Chromosome chr15
           scaffold_37, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr15 scaffold_37, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (11%)
          Length = 737

 Score = 58.0 bits (29), Expect = 3e-07
 Identities = 77/93 (82%)
 Strand = Plus / Plus

                                                                       
Query: 216 taagaaaaaacgttatcacaggcacactgctcgccagatccaagaaatggaagctttgtt 275
           |||||| || ||||||||| | |||||| |||  ||||| |||||  | ||||| |||||
Sbjct: 641 taagaagaagcgttatcaccgacacactcctcagcagattcaagagcttgaagcgttgtt 700

                                            
Query: 276 caaggaatgtccacacccggatgataagcaaag 308
           |||||| ||||| ||||| ||||| ||||||||
Sbjct: 701 caaggagtgtcctcacccagatgagaagcaaag 733