Miyakogusa Predicted Gene
- Lj2g3v1509500.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1509500.1 tr|G7KCC8|G7KCC8_MEDTR Lysine-specific
demethylase 5B OS=Medicago truncatula GN=MTR_5g029370 PE=4
SV,77.15,0,Clavaminate synthase-like,NULL; Small domain found in the
jumonji family of,Transcription factor jum,CUFF.37301.1
(2532 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|CB828057 similar to UniRef100_A7PC31 Cluster: Chromosom... 1021 0.0
gnl|LJGI|AV406708 similar to UniRef100_A7PC31 Cluster: Chromosom... 852 0.0
gnl|LJGI|TC61539 similar to UniRef100_A7PC31 Cluster: Chromosome... 735 0.0
gnl|LJGI|TC65048 similar to UniRef100_A6MZR3 Cluster: Jmjc domai... 559 e-158
>gnl|LJGI|CB828057 similar to UniRef100_A7PC31 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 519
Score = 1021 bits (515), Expect = 0.0
Identities = 518/519 (99%)
Strand = Plus / Plus
Query: 538 ggaggtcttcctcctacgtacttggaaaaagagttttggcatgaaatcggttgtgggaaa 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggaggtcttcctcctacgtacttggaaaaagagttttggcatgaaatcggttgtgggaaa 60
Query: 598 atggaaactgttgaatatgcatgtgatgttgatggcagtgctttctcatcttctcccaca 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atggaaactgttgaatatgcatgtgatgttgatggcagtgctttctcatcttctcccaca 120
Query: 658 gatccacttgggaacagcaaatggaatttgaagaaactttcgcggttgcccaaatcaatc 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gatccacttgggaacagcaaatggaatttgaagaaactttcgcggttgcccaaatcaatc 180
Query: 718 ttgcggttcttggaaacgtcaattccgggagtaacagaacccatgctatacattggaatg 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgcggttcttggaaacgtcaattccgggagtaacagaacccatgctatacattggaatg 240
Query: 778 ctgtttagtatgtttgcttggcatgtggaggatcattatttgtacagcattaattatcaa 837
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctttttagtatgtttgcttggcatgtggaggatcattatttgtacagcattaattatcaa 300
Query: 838 cactgtggggcatcaaaaacatggtacggcattccaggtcaagaagctttggaatttgaa 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cactgtggggcatcaaaaacatggtacggcattccaggtcaagaagctttggaatttgaa 360
Query: 898 agggtggtgagagaacatgtgtatactactgatattttgtcaagtgatggggaagacgga 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agggtggtgagagaacatgtgtatactactgatattttgtcaagtgatggggaagacgga 420
Query: 958 gcttttgatgttctcctggggaaaacaacactatttccgccaaatatcttgctggagcat 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gcttttgatgttctcctggggaaaacaacactatttccgccaaatatcttgctggagcat 480
Query: 1018 ggagtccctgtctacaaggctgttcagaagccaggggaa 1056
|||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggagtccctgtctacaaggctgttcagaagccaggggaa 519
>gnl|LJGI|AV406708 similar to UniRef100_A7PC31 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 430
Score = 852 bits (430), Expect = 0.0
Identities = 430/430 (100%)
Strand = Plus / Plus
Query: 1516 ttcaagtgtggaagcaagcacactcttcgtttgagggaggacattgtgaatatggaagat 1575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcaagtgtggaagcaagcacactcttcgtttgagggaggacattgtgaatatggaagat 60
Query: 1576 gcagccaagaagtttgagcaggaagatggagtattggaggagttaagcaagcaaaccgaa 1635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcagccaagaagtttgagcaggaagatggagtattggaggagttaagcaagcaaaccgaa 120
Query: 1636 actgatcaaaatatgtattcatatcctttgtcagatttgtttcagagagctgaggcaaat 1695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 actgatcaaaatatgtattcatatcctttgtcagatttgtttcagagagctgaggcaaat 180
Query: 1696 ggatacgtgccttattgcgagcttaaacttgattctgattttgagtgttatacaactcca 1755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggatacgtgccttattgcgagcttaaacttgattctgattttgagtgttatacaactcca 240
Query: 1756 gaacagtcaaataatcaagagtgtgctacacaaagtgttttcagacatagctctgaaaat 1815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaacagtcaaataatcaagagtgtgctacacaaagtgttttcagacatagctctgaaaat 300
Query: 1816 tataaagaagtgtctgatgtttccttttcttctgctgcatccactctttgttctctctca 1875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tataaagaagtgtctgatgtttccttttcttctgctgcatccactctttgttctctctca 360
Query: 1876 gaacctcttgagagctcctctgctcccagaaatgccgaggggcatagtaacttaaattta 1935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaacctcttgagagctcctctgctcccagaaatgccgaggggcatagtaacttaaattta 420
Query: 1936 ggcactattg 1945
||||||||||
Sbjct: 421 ggcactattg 430
>gnl|LJGI|TC61539 similar to UniRef100_A7PC31 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 773
Score = 735 bits (371), Expect = 0.0
Identities = 374/375 (99%)
Strand = Plus / Plus
Query: 1 atggttgaacgaagatcaagtttatctaaggaagctagaaatgggttagaatttttgaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 atggttgaacgaagatcaagtttatctaaggaagctagaaatgggttagaatttttgaag 458
Query: 61 cgtaaaaggcttcagaacgcaaatatgatgaacagaagtggtggagatgctttaagatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 cgtaaaaggcttcagaacgcaaatatgatgaacagaagtggtggagatgctttaagatct 518
Query: 121 tcgggatcttgtggcatgggattgcaagggagtgcagatgccttttccaagcggaaggtg 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 519 tcgggatcttgtggcatgggattgcaagggagtgcagatgtcttttccaagcggaaggtg 578
Query: 181 gataagtttgacacaagtaatctggaatggactgataagattatggagtgtcctgtgtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 gataagtttgacacaagtaatctggaatggactgataagattatggagtgtcctgtgtat 638
Query: 241 tctccaacaaaggaggaatttcaggatcctttaatttatttgcaaaaaatagctcctgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 tctccaacaaaggaggaatttcaggatcctttaatttatttgcaaaaaatagctcctgaa 698
Query: 301 gcttctaaatatggcatatgcaagattgtttcacctttgagtgcttctgtacctgctggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 gcttctaaatatggcatatgcaagattgtttcacctttgagtgcttctgtacctgctggg 758
Query: 361 gttgttttgatgaag 375
|||||||||||||||
Sbjct: 759 gttgttttgatgaag 773
>gnl|LJGI|TC65048 similar to UniRef100_A6MZR3 Cluster: Jmjc domain containing protein;
n=1; Oryza sativa Indica Group|Rep: Jmjc domain
containing protein - Oryza sativa subsp. indica (Rice),
partial (23%)
Length = 741
Score = 559 bits (282), Expect = e-158
Identities = 282/282 (100%)
Strand = Plus / Plus
Query: 2251 agcagaagcaatgaatcaagtttcaaatttaatagttatcctgatactcataaagtttat 2310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agcagaagcaatgaatcaagtttcaaatttaatagttatcctgatactcataaagtttat 60
Query: 2311 ggcgatatttcctcaaaggacaggtctgctaggggaaatggcattcccatttcagtaagg 2370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggcgatatttcctcaaaggacaggtctgctaggggaaatggcattcccatttcagtaagg 120
Query: 2371 tataagaagccatgcaacggggaattaagtgtgcaacgagatcaccaccggagcgatagg 2430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tataagaagccatgcaacggggaattaagtgtgcaacgagatcaccaccggagcgatagg 180
Query: 2431 ttgcagcaaacttctagggaaccgccttccattgagttagggacaaagcgcctaaaagtc 2490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgcagcaaacttctagggaaccgccttccattgagttagggacaaagcgcctaaaagtc 240
Query: 2491 cgaggcccctcatttttgggcttagagagcagattgagttga 2532
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgaggcccctcatttttgggcttagagagcagattgagttga 282