Miyakogusa Predicted Gene

Lj2g3v1497160.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1497160.1 tr|B9GZI1|B9GZI1_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_757200 PE=4
SV=1,75,8e-19,seg,NULL,CUFF.37272.1
         (330 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58195 similar to UniRef100_Q9LQM9 Cluster: F5D14.6 pr...   654   0.0  

>gnl|LJGI|TC58195 similar to UniRef100_Q9LQM9 Cluster: F5D14.6 protein; n=1;
           Arabidopsis thaliana|Rep: F5D14.6 protein - Arabidopsis
           thaliana (Mouse-ear cress), partial (11%)
          Length = 875

 Score =  654 bits (330), Expect = 0.0
 Identities = 330/330 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaatagttcatcaccggctcattcatcgatatccaccacggcggttgtgagcggcggc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  atgaatagttcatcaccggctcattcatcgatatccaccacggcggttgtgagcggcggc 128

                                                                       
Query: 61  ggtgcaagtaacgcggctgtttcctttgacgacctccatttcccgtttgatcccatttca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 ggtgcaagtaacgcggctgtttcctttgacgacctccatttcccgtttgatcccatttca 188

                                                                       
Query: 121 acgcaagagcgaaaggacgaggttatgctagtgttaaaatcggatatcatggctgcactt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 acgcaagagcgaaaggacgaggttatgctagtgttaaaatcggatatcatggctgcactt 248

                                                                       
Query: 181 gacaaggaggttaaatccttggatgaagataactggaagtttgaaggacctcgttctcgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gacaaggaggttaaatccttggatgaagataactggaagtttgaaggacctcgttctcgt 308

                                                                       
Query: 241 attaaccttacatcacgtcgaggcggaggtggtcctctcccttggcaaacagagatttca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 attaaccttacatcacgtcgaggcggaggtggtcctctcccttggcaaacagagatttca 368

                                         
Query: 301 aagaattggaatctgcctccaccaaaatag 330
           ||||||||||||||||||||||||||||||
Sbjct: 369 aagaattggaatctgcctccaccaaaatag 398