Miyakogusa Predicted Gene
- Lj2g3v1496120.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1496120.1 Non Chatacterized Hit- tr|B8ATJ8|B8ATJ8_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,63.41,0.000000003,In Between Ring fingers,Zinc finger,
C6HC-type; RING/U-box,NULL; IBR,Zinc finger, C6HC-type;
SUBFAMI,CUFF.37273.1
(774 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69311 similar to UniRef100_A7PC55 Cluster: Chromosome... 777 0.0
gnl|LJGI|CB828189 similar to UniRef100_A7PC55 Cluster: Chromosom... 283 8e-76
>gnl|LJGI|TC69311 similar to UniRef100_A7PC55 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 727
Score = 777 bits (392), Expect = 0.0
Identities = 395/396 (99%)
Strand = Plus / Plus
Query: 379 atggcaatttctcgaactgaaggttgcaacaaaatgaagtgcggtaattgtggacagtac 438
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 atggcaatttctcgaactaaaggttgcaacaaaatgaagtgcggtaattgtggacagtac 61
Query: 439 ttctgttaccgctgcaacaaagcaattgatgaaacagatccatatggacatttcagggat 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ttctgttaccgctgcaacaaagcaattgatgaaacagatccatatggacatttcagggat 121
Query: 499 ggatcatgtgaattattccctcgcgagatgattgatgcctggcaagagaacttaaatgct 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ggatcatgtgaattattccctcgcgagatgattgatgcctggcaagagaacttaaatgct 181
Query: 559 cgccaattagtaggacaagtacaagctgaactcttccctcaacgtggcacagcatgtcct 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cgccaattagtaggacaagtacaagctgaactcttccctcaacgtggcacagcatgtcct 241
Query: 619 agttgtcgacaatttaatgcaaagattggaaataacaatcacatgttttgctgggcatgc 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 agttgtcgacaatttaatgcaaagattggaaataacaatcacatgttttgctgggcatgc 301
Query: 679 caaagccattactgctacttatgcaatgaggttgtcaggcgcggcactaagcactatgga 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 caaagccattactgctacttatgcaatgaggttgtcaggcgcggcactaagcactatgga 361
Query: 739 ccgaaaggctgcaagcagcacagtgagggatagtat 774
||||||||||||||||||||||||||||||||||||
Sbjct: 362 ccgaaaggctgcaagcagcacagtgagggatagtat 397
>gnl|LJGI|CB828189 similar to UniRef100_A7PC55 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 158
Score = 283 bits (143), Expect = 8e-76
Identities = 154/158 (97%)
Strand = Plus / Plus
Query: 87 gtcaatgtctgatgttgttcattgcccaagatgtgaaacaccttgtatagaagatgaaga 146
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtcaatgtctgatgttgttcatggcccaagatgtgaaacaccttgtatagaagatgaaga 60
Query: 147 ccatcatgctcaatgccctcagtgcttttttagcttctgtaccctttgtagggaacggcg 206
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 61 ccatgatgctcaatgccctcagtgctttttnagcttctgtaccctttgtagggaacggcg 120
Query: 207 gcatgttggcatagcatgcatgacgctggagatgaaga 244
||||||||||||| ||||||||||||||||||||||||
Sbjct: 121 gcatgttggcataacatgcatgacgctggagatgaaga 158