Miyakogusa Predicted Gene
- Lj2g3v1485060.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1485060.1 Non Chatacterized Hit- tr|C6TKM1|C6TKM1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55782
PE,89.52,0,UNCHARACTERIZED,NULL; SNARE_assoc,SNARE associated Golgi
protein,CUFF.37262.1
(633 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72162 similar to UniRef100_A7PC67 Cluster: Chromosome... 1255 0.0
gnl|LJGI|FS341295 similar to UniRef100_Q8L586 Cluster: Uncharact... 54 1e-06
>gnl|LJGI|TC72162 similar to UniRef100_A7PC67 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (83%)
Length = 1333
Score = 1255 bits (633), Expect = 0.0
Identities = 633/633 (100%)
Strand = Plus / Plus
Query: 1 atgcccgattccgattacagcttcctcaagttccctcacaccctcgaagatctcaaactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 atgcccgattccgattacagcttcctcaagttccctcacaccctcgaagatctcaaactc 326
Query: 61 cttagagataaccttgagacttatacaagtgactacactgctcaagtcttggtgggatac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 cttagagataaccttgagacttatacaagtgactacactgctcaagtcttggtgggatac 386
Query: 121 tgcgtggtttatattttcatgcagactttcatgattccagggactgttttcatgtcattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tgcgtggtttatattttcatgcagactttcatgattccagggactgttttcatgtcattg 446
Query: 181 cttgctggagcactctttggagtctttaaaggcgtggctctggttgtattcaatgcaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 cttgctggagcactctttggagtctttaaaggcgtggctctggttgtattcaatgcaacc 506
Query: 241 gctggagcttcttcatgcttcttcctgtcaaaagtcgttggacgtcctcttctctcaact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gctggagcttcttcatgcttcttcctgtcaaaagtcgttggacgtcctcttctctcaact 566
Query: 301 ctctggccagacaagttgctattcttccaaaaccaggtggcaaaaagaaggaagggtttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ctctggccagacaagttgctattcttccaaaaccaggtggcaaaaagaaggaagggtttg 626
Query: 361 ttgaactacatgcttttcctgaggctgactccaaccctgccaaacacatttattaatttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 ttgaactacatgcttttcctgaggctgactccaaccctgccaaacacatttattaatttt 686
Query: 421 gcttcaccggtcgtaaacgtgccctatcatattttcttcattgcaactgttattggactc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 gcttcaccggtcgtaaacgtgccctatcatattttcttcattgcaactgttattggactc 746
Query: 481 atacctgctgcttatgtcactgtcagggctgggttagctcttggagagttaaaatccgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 atacctgctgcttatgtcactgtcagggctgggttagctcttggagagttaaaatccgtt 806
Query: 541 ggggatctctatgatttcaactcagttgctactttgtgccttataggtgttgtttcaatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 ggggatctctatgatttcaactcagttgctactttgtgccttataggtgttgtttcaatt 866
Query: 601 acacccacacttataagcaagaaggagtcatag 633
|||||||||||||||||||||||||||||||||
Sbjct: 867 acacccacacttataagcaagaaggagtcatag 899
>gnl|LJGI|FS341295 similar to UniRef100_Q8L586 Cluster: Uncharacterized membrane
protein At4g09580; n=1; Arabidopsis thaliana|Rep:
Uncharacterized membrane protein At4g09580 - Arabidopsis
thaliana (Mouse-ear cress), partial (57%)
Length = 734
Score = 54.0 bits (27), Expect = 1e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 221 tggttgtattcaatgcaaccgctggagcttcttcatgcttctt 263
||||||| |||||||| || |||||||| ||||||||||||||
Sbjct: 518 tggttgttttcaatgccactgctggagcctcttcatgcttctt 560