Miyakogusa Predicted Gene
- Lj2g3v1468090.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1468090.1 Non Chatacterized Hit- tr|K3Y162|K3Y162_SETIT
Uncharacterized protein (Fragment) OS=Setaria italica
,68.75,0.000005,seg,NULL; DNA BINDING,NULL; FAMILY NOT
NAMED,NULL,CUFF.37185.1
(1305 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61782 weakly similar to UniRef100_A7PGV2 Cluster: Chr... 1197 0.0
gnl|LJGI|TC66060 837 0.0
>gnl|LJGI|TC61782 weakly similar to UniRef100_A7PGV2 Cluster: Chromosome chr17
scaffold_16, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (18%)
Length = 737
Score = 1197 bits (604), Expect = 0.0
Identities = 604/604 (100%)
Strand = Plus / Plus
Query: 93 gtcaaagaagaaatctccggcggaatcgagaatctgcaccgttggattgagacgatctcc 152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 gtcaaagaagaaatctccggcggaatcgagaatctgcaccgttggattgagacgatctcc 193
Query: 153 ccggttcatcaacaatggggtcgctgaggttccctctctcagacgatctcccaggttctc 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 ccggttcatcaacaatggggtcgctgaggttccctctctcagacgatctcccaggttctc 253
Query: 213 cgatgaccaaaccctagaaaatgagcagagaaccccagagaaattgagcaaacccggtaa 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 cgatgaccaaaccctagaaaatgagcagagaaccccagagaaattgagcaaacccggtaa 313
Query: 273 cgcttctggtggttcggtgaaatccgcgagagtgaagaagggttctgtagcaaaaaagaa 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 cgcttctggtggttcggtgaaatccgcgagagtgaagaagggttctgtagcaaaaaagaa 373
Query: 333 agagaacagtgctgttgctgatgaggggattgcggttgaagatggaggcaaagggaaagg 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 agagaacagtgctgttgctgatgaggggattgcggttgaagatggaggcaaagggaaagg 433
Query: 393 gagaaatggggtcctggcagggaagagaaagcgcggtggcggcggagaaattcatgaagg 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gagaaatggggtcctggcagggaagagaaagcgcggtggcggcggagaaattcatgaagg 493
Query: 453 gtggacaaaggaacaagaattggctttgcaaagggcttattattctgcaaagcccagccc 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 gtggacaaaggaacaagaattggctttgcaaagggcttattattctgcaaagcccagccc 553
Query: 513 ccatttctggaagaacgtttcgaaactggttcctggaaagtctcaacaagattgctttga 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 ccatttctggaagaacgtttcgaaactggttcctggaaagtctcaacaagattgctttga 613
Query: 573 taggattcatcatgactatatgacaccgcctcagtctcagcctcgatcaagggcaaagac 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 taggattcatcatgactatatgacaccgcctcagtctcagcctcgatcaagggcaaagac 673
Query: 633 aatgaattcatcaccacttcataagttctcaatatcagcaagtaaagtgctcaagcctat 692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 aatgaattcatcaccacttcataagttctcaatatcagcaagtaaagtgctcaagcctat 733
Query: 693 tgat 696
||||
Sbjct: 734 tgat 737
Score = 56.0 bits (28), Expect = 6e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 atgccgaagagaaactcctccgtctgca 28
||||||||||||||||||||||||||||
Sbjct: 42 atgccgaagagaaactcctccgtctgca 69
>gnl|LJGI|TC66060
Length = 762
Score = 837 bits (422), Expect = 0.0
Identities = 422/422 (100%)
Strand = Plus / Plus
Query: 884 agcagctaaaagaaaaccaaggtttactgaatagttgcacgggaacatcatcttcaagcc 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agcagctaaaagaaaaccaaggtttactgaatagttgcacgggaacatcatcttcaagcc 60
Query: 944 agaagaagaccctttcaagatttagtaactcacgcgtttcagatgttgttagtcccccag 1003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agaagaagaccctttcaagatttagtaactcacgcgtttcagatgttgttagtcccccag 120
Query: 1004 tgctaaaacaggtaaagaacaaggtacagcatgagaaatacatcaatcaattacgatgta 1063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgctaaaacaggtaaagaacaaggtacagcatgagaaatacatcaatcaattacgatgta 180
Query: 1064 gggaggctagaagaatggcagcctctaaacggacaaaaaagaccataactggaaaaatga 1123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gggaggctagaagaatggcagcctctaaacggacaaaaaagaccataactggaaaaatga 240
Query: 1124 tgggtgaaggaagcagcattctgaaaaaggatgcagttaaagaagcaaaagttgccttgg 1183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgggtgaaggaagcagcattctgaaaaaggatgcagttaaagaagcaaaagttgccttgg 300
Query: 1184 tatctgaagctaaagatgctatcaataagtttcaacagtcacaagttaatttcatgggcg 1243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tatctgaagctaaagatgctatcaataagtttcaacagtcacaagttaatttcatgggcg 360
Query: 1244 attcgtgtaattctgatgaagacaatgatgaagactttggagatgaatatgaaagtccgt 1303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 attcgtgtaattctgatgaagacaatgatgaagactttggagatgaatatgaaagtccgt 420
Query: 1304 ag 1305
||
Sbjct: 421 ag 422