Miyakogusa Predicted Gene
- Lj2g3v1468080.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1468080.2 Non Chatacterized Hit- tr|I1J4X0|I1J4X0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.12503 PE,83.95,0,HLH,
helix-loop-helix DNA-binding domain,Helix-loop-helix domain;
HLH,Helix-loop-helix domain; helix,CUFF.37195.2
(1050 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67085 similar to UniRef100_A9YWR2 Cluster: BHLH trans... 1199 0.0
gnl|LJGI|TC68587 homologue to UniRef100_A9YWR2 Cluster: BHLH tra... 678 0.0
gnl|LJGI|BP036503 homologue to UniRef100_A9YWR2 Cluster: BHLH tr... 480 e-135
gnl|LJGI|AV423238 similar to UniRef100_A9YWR2 Cluster: BHLH tran... 317 8e-86
gnl|LJGI|TC60560 similar to UniRef100_A7NUH5 Cluster: Chromosome... 98 1e-19
gnl|LJGI|BP059876 homologue to UniRef100_A9YWR2 Cluster: BHLH tr... 56 5e-07
>gnl|LJGI|TC67085 similar to UniRef100_A9YWR2 Cluster: BHLH transcription factor;
n=1; Medicago truncatula|Rep: BHLH transcription factor
- Medicago truncatula (Barrel medic), partial (41%)
Length = 1037
Score = 1199 bits (605), Expect = 0.0
Identities = 622/630 (98%)
Strand = Plus / Plus
Query: 46 agacaagaagagcagagagnnnnnnncagaacagggatggagctttctcatcttagtttt 105
||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 46 agacaagaagagcagagagaaaaaaacagaacagggatggagctttctcatcttagtttt 105
Query: 106 ctggaggaactactagctccaagaaaagacacttcttgttggaatgctttgtccactgag 165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 ctggaggaactactagctccaagaaaagacacttcttgttggaatgctttgtccactgag 165
Query: 166 ttgaacgagccactccctagtgcttggagctttgactcatttgatgagaatcaagcttta 225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 ttgaacgagccactccctagtgcttggagctttgactcatttgatgagaatcaagcttta 225
Query: 226 gcttctctatatcctccatttgctgcattttcaacaccattagaccagagatttgaatgt 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 gcttctctatatcctccatttgctgcattttcaacaccattagaccagagatttgaatgt 285
Query: 286 ccttatggcagtgatgcagctgcagcatacccatttgttggtggtttcacaatgccagag 345
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 286 ccttatggcagtgatgcagctgcagcatacccatttgttgatggtttcacaatgccagag 345
Query: 346 cttgattcatcatacaccaggaaagaggagtcatcagcaccacctccacttttgcctcaa 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 cttgattcatcatacaccaggaaagaggagtcatcagcaccacctccacttttgcctcaa 405
Query: 406 gaagataaccagagtttggatgaagagtttgggtttctgggcagtgataataaccagggt 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gaagataaccagagtttggatgaagagtttgggtttctgggcagtgataataaccagggt 465
Query: 466 ttggagcagataaaagatagctgcaaaatcgaggaacaggtttcagaggttccaatggtg 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 ttggagcagataaaagatagctgcaaaatcgaggaacaggtttcagaggttccaatggtg 525
Query: 526 ttcaacatgggtatgtgtggagagaaaaaggctaaatccaaaaagctagaaggacagcct 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ttcaacatgggtatgtgtggagagaaaaaggctaaatccaaaaagctagaaggacagcct 585
Query: 586 tctaagaatctcatggcagagaggaggaggagaaagcgtctcaatgaccggctttccatg 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 tctaagaatctcatggcagagaggaggaggagaaagcgtctcaatgaccggctttccatg 645
Query: 646 ctaaggtcaatagttcctaagatcagcaag 675
||||||||||||||||||||||||||||||
Sbjct: 646 ctaaggtcaatagttcctaagatcagcaag 675
Score = 63.9 bits (32), Expect = 2e-09
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 674 agatggacaggacctccattcttggagacacc 705
||||||||||||||||||||||||||||||||
Sbjct: 1006 agatggacaggacctccattcttggagacacc 1037
>gnl|LJGI|TC68587 homologue to UniRef100_A9YWR2 Cluster: BHLH transcription factor;
n=1; Medicago truncatula|Rep: BHLH transcription factor -
Medicago truncatula (Barrel medic), partial (44%)
Length = 598
Score = 678 bits (342), Expect = 0.0
Identities = 383/401 (95%), Gaps = 18/401 (4%)
Strand = Plus / Plus
Query: 650 ggtcaatagttcctaagatcagcaagatggacaggacctccattcttggagacaccattg 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtcaatagttcctaagatcagcaagatggacaggacctccattcttggagacaccattg 60
Query: 710 attacatgaaagagcttcttgaaaggattggtaacctgcaagaagaagaaacggaggagg 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attacatgaaagagcttcttgaaaggattggtaacctgcaagaagaagaaacggaggagg 120
Query: 770 gaaagaatcagatagacctcttgggaatttctaaggagcaaaagccaaatgaagcaatgg 829
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaaagaatcagatagacctcttgggaatttctaaggagcaaaagccaaatgaagcaatg- 179
Query: 830 taagaaattctcccaagtttgatgttgaaagaaaagaccaagacacgaggatcagcatct 889
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 -----------------tttgatgttgaaagaaaagaccaagacacgaggatcagcatct 222
Query: 890 gctgtgccacaaagccagggttattactgtcaacagtgaacactttagaagcattaggcc 949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 gctgtgccacaaagccagggttattactgtcaacagtgaacactttagaagcattaggcc 282
Query: 950 ttgagattcaccaatgtgtgataagcagcttcagtgatttttcattgcaagcatcttgct 1009
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ttgagattcaccaatgtgtgataagcagcttcagtgatttttcattgcaagcatcttgct 342
Query: 1010 cagaggctgctgggcagaggaattgtatgagccctgaagag 1050
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 cagaggctgctgggcagaggaattgtatgagccctgaagag 383
>gnl|LJGI|BP036503 homologue to UniRef100_A9YWR2 Cluster: BHLH transcription factor;
n=1; Medicago truncatula|Rep: BHLH transcription factor -
Medicago truncatula (Barrel medic), partial (31%)
Length = 477
Score = 480 bits (242), Expect = e-135
Identities = 257/262 (98%)
Strand = Plus / Minus
Query: 789 cttgggaatttctaaggagcaaaagccaaatgaagcaatggtaagaaattctcccaagtt 848
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 477 cttgggaatttctaaggagcacaagcccaatgaagcaatggtaagaaattctcccaagtt 418
Query: 849 tgatgttgaaagaaaagaccaagacacgaggatcagcatctgctgtgccacaaagccagg 908
|||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 417 tgatgttgaaagaaaagacccagacacgaggatcagcatctgctgtgccaccaagccagg 358
Query: 909 gttattactgtcaacagtgaacactttagaagcattaggccttgagattcaccaatgtgt 968
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 357 gttattactgtcaacagtgaacactttagaagcattaggccttgagattcacccatgtgt 298
Query: 969 gataagcagcttcagtgatttttcattgcaagcatcttgctcagaggctgctgggcagag 1028
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 gataagcagcttcagtgatttttcattgcaagcatcttgctcagaggctgctgggcagag 238
Query: 1029 gaattgtatgagccctgaagag 1050
||||||||||||||||||||||
Sbjct: 237 gaattgtatgagccctgaagag 216
>gnl|LJGI|AV423238 similar to UniRef100_A9YWR2 Cluster: BHLH transcription factor;
n=1; Medicago truncatula|Rep: BHLH transcription factor
- Medicago truncatula (Barrel medic), partial (6%)
Length = 373
Score = 317 bits (160), Expect = 8e-86
Identities = 336/374 (89%), Gaps = 25/374 (6%)
Strand = Plus / Plus
Query: 46 agacaagaagagcagagagnnnnnnncagaacagggatggagctttctcatcttagtttt 105
||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 25 agacaagaagagcagagagaaaaaaacagaacagggatggagctttctcatcttagtttt 84
Query: 106 ctggaggaactactagctccaagaaaagacacttcttgttggaatgctttgtccactgag 165
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 85 ctggaggaactactagctccaagaaaagacacttcttgttggaatg-tttgtccactgag 143
Query: 166 ttgaacgagccactccctagtgcttggagctttgactcatttgatgagaatcaagcttta 225
|||||||| ||| |||||| |||||||||| |||| ||| ||||||||||||||||||
Sbjct: 144 ttgaacga-cca-tcccta-tgcttggagc-ttga-tca-ttgatgagaatcaagctt-- 195
Query: 226 gcttctctatatcctccatttgctgcattttcaacaccattagaccagagatttgaatgt 285
||||||||||| ||||||| ||| |||| ||| ||||| ||| | | ||||||||
Sbjct: 196 acttctctatat-ctccatt--gtgc--tttc-aca-catta-acc--anaattgaatgt 245
Query: 286 ccttatggcagtgatgcagctgcagcatacccatttgttggtggtttcacaatgccagag 345
| | |||| ||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 246 c--tttggc-gtgatgcagctgc-gcatacccatt--gtggtggtttcacaatgccagag 299
Query: 346 cttgattcatcatacaccaggaaagaggagtcatcagcaccacctccacttttgcctcaa 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 cttgattcatcatacaccaggaaagaggagtcatcagcaccacctccacttttgcctcaa 359
Query: 406 gaagataaccagag 419
||||||||||||||
Sbjct: 360 gaagataaccagag 373
>gnl|LJGI|TC60560 similar to UniRef100_A7NUH5 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (51%)
Length = 1453
Score = 97.6 bits (49), Expect = 1e-19
Identities = 124/149 (83%)
Strand = Plus / Plus
Query: 580 cagccttctaagaatctcatggcagagaggaggaggagaaagcgtctcaatgaccggctt 639
||||| || |||||||| ||||| |||||||| ||||||||| | | ||||| |||||
Sbjct: 569 cagccctccaagaatctaatggctgagaggagaaggagaaagaggttaaatgataggctt 628
Query: 640 tccatgctaaggtcaatagttcctaagatcagcaagatggacaggacctccattcttgga 699
|||||||| || ||||| || || ||||| || ||||||||||| || | || ||||||
Sbjct: 629 tccatgctgagatcaattgtccccaagataagtaagatggacagaacagctatacttgga 688
Query: 700 gacaccattgattacatgaaagagcttct 728
||||| ||||||||||||||||| |||||
Sbjct: 689 gacactattgattacatgaaagaacttct 717
Score = 77.8 bits (39), Expect = 1e-13
Identities = 96/115 (83%)
Strand = Plus / Plus
Query: 901 aagccagggttattactgtcaacagtgaacactttagaagcattaggccttgagattcac 960
|||||||| || || || || ||||||||||| || ||||||||||||||||| |||||
Sbjct: 878 aagccaggcttgttgctttctacagtgaacaccttggaagcattaggccttgatattcag 937
Query: 961 caatgtgtgataagcagcttcagtgatttttcattgcaagcatcttgctcagagg 1015
||||| || || ||||| |||| |||||| || |||| || |||||||||||||
Sbjct: 938 caatgcgttattagcagtttcaatgatttcacaatgcaggcttcttgctcagagg 992
>gnl|LJGI|BP059876 homologue to UniRef100_A9YWR2 Cluster: BHLH transcription factor;
n=1; Medicago truncatula|Rep: BHLH transcription factor
-, partial (4%)
Length = 346
Score = 56.0 bits (28), Expect = 5e-07
Identities = 82/91 (90%), Gaps = 7/91 (7%)
Strand = Plus / Minus
Query: 960 ccaatgtgtgataag-cagcttc-agtgatttttca-ttg-caagcatcttgctca-gag 1014
||||||||||||||| ||||||| |||||||||||| ||| | ||||||||| ||| |||
Sbjct: 277 ccaatgtgtgataagccagcttcnagtgatttttcacttgcccagcatcttgntcacgag 218
Query: 1015 g-ctgctgggca-gaggaattgtatgagccc 1043
| |||||||||| ||||||||||||||||||
Sbjct: 217 gnctgctgggcacgaggaattgtatgagccc 187