Miyakogusa Predicted Gene

Lj2g3v1467930.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1467930.1 tr|A9YWR6|A9YWR6_MEDTR ABC transporter
OS=Medicago truncatula GN=STR2 PE=2 SV=1,87.12,0,seg,NULL;
ABC2_membrane,ABC-2 type transporter; ATP-BINDING CASSETTE TRANSPORTER
PLANT,NULL; ATP-BIN,CUFF.37176.1
         (796 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO012322 similar to UniRef100_A9YWR6 Cluster: ABC trans...   716   0.0  

>gnl|LJGI|GO012322 similar to UniRef100_A9YWR6 Cluster: ABC transporter; n=1; Medicago
           truncatula|Rep: ABC transporter - Medicago truncatula
           (Barrel medic), partial (29%)
          Length = 646

 Score =  716 bits (361), Expect = 0.0
 Identities = 361/361 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcgccgcaacttcataaacataaggaggacccctgagcttttcctgtcaagactcatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 atgcgccgcaacttcataaacataaggaggacccctgagcttttcctgtcaagactcatg 232

                                                                       
Query: 61  gtcctcaccttcatgggtttcatgatggccaccatgttccacaaccccaaagagtccttg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 gtcctcaccttcatgggtttcatgatggccaccatgttccacaaccccaaagagtccttg 292

                                                                       
Query: 121 caaggaatcacgaaccgtctcagcttcttcatcttcaccgtgtgcctctttttcttctct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 caaggaatcacgaaccgtctcagcttcttcatcttcaccgtgtgcctctttttcttctct 352

                                                                       
Query: 181 tccaatgatgccgtcccggccttcatccaagagaggttcatcttcatccgcgagacttca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 tccaatgatgccgtcccggccttcatccaagagaggttcatcttcatccgcgagacttca 412

                                                                       
Query: 241 cacaatgcctacagagcttcctcctacacctttgcaggcctaatcacccacatgccattt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 cacaatgcctacagagcttcctcctacacctttgcaggcctaatcacccacatgccattt 472

                                                                       
Query: 301 cttgctctccaagcttcagcttatgcaggcattgtttggtttgctttgcagcttagaggc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 cttgctctccaagcttcagcttatgcaggcattgtttggtttgctttgcagcttagaggc 532

            
Query: 361 c 361
           |
Sbjct: 533 c 533



 Score =  139 bits (70), Expect = 3e-32
 Identities = 70/70 (100%)
 Strand = Plus / Plus

                                                                       
Query: 405 aaccaattcattcgttgtgtttgtgagctcggtcgttccgaactacatcttggggtatgc 464
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 aaccaattcattcgttgtgtttgtgagctcggtcgttccgaactacatcttggggtatgc 636

                     
Query: 465 agcggttatc 474
           ||||||||||
Sbjct: 637 agcggttatc 646