Miyakogusa Predicted Gene
- Lj2g3v1467850.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1467850.1 tr|A9YWS1|A9YWS1_MEDTR MADS-box protein
OS=Medicago truncatula GN=MTR_5g031000 PE=3
SV=1,83.51,0,MADS_BOX_1,Transcription factor, MADS-box; AGL21
(AGAMOUS-LIKE 21), TRANSCRIPTION FACTOR,NULL; MADS ,CUFF.37166.1
(567 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO010718 similar to UniRef100_A9YWS1 Cluster: MADS-box ... 1116 0.0
gnl|LJGI|FS322895 similar to UniRef100_A7QWA5 Cluster: Chromosom... 101 5e-21
gnl|LJGI|TC69713 similar to UniRef100_A7QWA5 Cluster: Chromosome... 101 5e-21
gnl|LJGI|TC65524 similar to UniRef100_A7QWA5 Cluster: Chromosome... 101 5e-21
gnl|LJGI|FS318714 similar to UniRef100_Q9SZJ6 Cluster: Agamous-l... 64 1e-09
gnl|LJGI|FS333501 similar to UniRef100_A7NUI9 Cluster: Chromosom... 64 1e-09
gnl|LJGI|DC595031 similar to UniRef100_A7NUI9 Cluster: Chromosom... 64 1e-09
gnl|LJGI|FS335696 similar to UniRef100_Q67BK3 Cluster: AGL15; n=... 58 6e-08
>gnl|LJGI|GO010718 similar to UniRef100_A9YWS1 Cluster: MADS-box protein; n=1;
Medicago truncatula|Rep: MADS-box protein - Medicago
truncatula (Barrel medic), partial (78%)
Length = 681
Score = 1116 bits (563), Expect = 0.0
Identities = 566/567 (99%)
Strand = Plus / Plus
Query: 1 atgggaagagggaagattgtgattcaaaggatcgacaactccacgagcaggcaagtgact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 atgggaagagggaagattgtgattcaaaggatcgacaactccacgagcaggcaagtgact 133
Query: 61 ttctcaaagaggagaaagggattgatcaagaaagccaaagagttagccatcctctgtgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 ttctcaaagaggagaaagggattgatcaagaaagccaaagagttagccatcctctgtgat 193
Query: 121 gcccaagttggacttgtcatattctccagcacaggaaagctttatgaatattcaagcacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 gcccaagttggacttgtcatattctccagcacaggaaagctttatgaatattcaagcacc 253
Query: 181 agcatgaaatcagtgatcgagagatataagacatgcaagggggaacatcaactaataaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 agcatgaaatcagtgatcgagagatataagacatgcaagggggaacatcaactaataaat 313
Query: 241 ccagaatctgaagccaagttttggcaaagggaggcagaaggtttaaagcagcaagtgcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ccagaatctgaagccaagttttggcaaagggaggcagaaggtttaaagcagcaagtgcag 373
Query: 301 aatctacaagaaaaccataggcaattgcttggagaacagctctatggtttgagtgtgaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 aatctacaagaaaaccataggcaattgcttggagaacagctctatggtttgagtgtgaga 433
Query: 361 aacctacaggatctagagaatcaactagaaatgagtctccaaggtgtccgcatgaaaaag 420
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 434 aacctacaggatctagagaatcaactagaaatgagtctccaaggtgtccgcacgaaaaag 493
Query: 421 gaaaatactctgacagatgagatccaagagctgaaccgaaagggaaacctcatacatcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 gaaaatactctgacagatgagatccaagagctgaaccgaaagggaaacctcatacatcag 553
Query: 481 gacaacatggagctttataagaaggtaaacctcattcaacaagaaaacaaacaactacgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gacaacatggagctttataagaaggtaaacctcattcaacaagaaaacaaacaactacgc 613
Query: 541 aaaaaggtgtatggcacaactgaaacg 567
|||||||||||||||||||||||||||
Sbjct: 614 aaaaaggtgtatggcacaactgaaacg 640
>gnl|LJGI|FS322895 similar to UniRef100_A7QWA5 Cluster: Chromosome undetermined
scaffold_201, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_201,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (73%)
Length = 723
Score = 101 bits (51), Expect = 5e-21
Identities = 156/191 (81%)
Strand = Plus / Plus
Query: 1 atgggaagagggaagattgtgattcaaaggatcgacaactccacgagcaggcaagtgact 60
||||| ||||| ||||||| ||||| ||||||||||| ||||| ||| ||||||| |||
Sbjct: 213 atggggagaggaaagattgcgattcggaggatcgacaattccactagccggcaagtaact 272
Query: 61 ttctcaaagaggagaaagggattgatcaagaaagccaaagagttagccatcctctgtgat 120
||||| ||||| || || |||||| | |||||||| ||||| || |||| || ||||||
Sbjct: 273 ttctccaagagaaggaatggattgctgaagaaagctaaagaattgtccattctttgtgat 332
Query: 121 gcccaagttggacttgtcatattctccagcacaggaaagctttatgaatattcaagcacc 180
|| |||||||| | | | ||||||||||| || ||||||||||| ||| | |||||
Sbjct: 333 gctgaagttggattgattgtgttctccagcactgggaagctttatgagtatgctagcact 392
Query: 181 agcatgaaatc 191
|||||||||||
Sbjct: 393 agcatgaaatc 403
>gnl|LJGI|TC69713 similar to UniRef100_A7QWA5 Cluster: Chromosome undetermined
scaffold_201, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_201,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (81%)
Length = 1063
Score = 101 bits (51), Expect = 5e-21
Identities = 156/191 (81%)
Strand = Plus / Plus
Query: 1 atgggaagagggaagattgtgattcaaaggatcgacaactccacgagcaggcaagtgact 60
||||| ||||| ||||||| ||||| ||||||||||| ||||| ||| ||||||| |||
Sbjct: 99 atggggagaggaaagattgcgattcggaggatcgacaattccactagccggcaagtaact 158
Query: 61 ttctcaaagaggagaaagggattgatcaagaaagccaaagagttagccatcctctgtgat 120
||||| ||||| || || |||||| | |||||||| ||||| || |||| || ||||||
Sbjct: 159 ttctccaagagaaggaatggattgctgaagaaagctaaagaattgtccattctttgtgat 218
Query: 121 gcccaagttggacttgtcatattctccagcacaggaaagctttatgaatattcaagcacc 180
|| |||||||| | | | ||||||||||| || ||||||||||| ||| | |||||
Sbjct: 219 gctgaagttggattgattgtgttctccagcactgggaagctttatgagtatgctagcact 278
Query: 181 agcatgaaatc 191
|||||||||||
Sbjct: 279 agcatgaaatc 289
>gnl|LJGI|TC65524 similar to UniRef100_A7QWA5 Cluster: Chromosome undetermined
scaffold_201, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_201,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (82%)
Length = 1068
Score = 101 bits (51), Expect = 5e-21
Identities = 156/191 (81%)
Strand = Plus / Plus
Query: 1 atgggaagagggaagattgtgattcaaaggatcgacaactccacgagcaggcaagtgact 60
||||| ||||| ||||||| ||||| ||||||||||| ||||| ||| ||||||| |||
Sbjct: 106 atggggagaggaaagattgcgattcggaggatcgacaattccactagccggcaagtaact 165
Query: 61 ttctcaaagaggagaaagggattgatcaagaaagccaaagagttagccatcctctgtgat 120
||||| ||||| || || |||||| | |||||||| ||||| || |||| || ||||||
Sbjct: 166 ttctccaagagaaggaatggattgctgaagaaagctaaagaattgtccattctttgtgat 225
Query: 121 gcccaagttggacttgtcatattctccagcacaggaaagctttatgaatattcaagcacc 180
|| |||||||| | | | ||||||||||| || ||||||||||| ||| | |||||
Sbjct: 226 gctgaagttggattgattgtgttctccagcactgggaagctttatgagtatgctagcact 285
Query: 181 agcatgaaatc 191
|||||||||||
Sbjct: 286 agcatgaaatc 296
>gnl|LJGI|FS318714 similar to UniRef100_Q9SZJ6 Cluster: Agamous-like MADS-box protein
AGL21; n=2; Arabidopsis thaliana|Rep: Agamous-like
MADS-box protein AGL21 - Arabidopsis thaliana (Mouse-ear
cress), partial (47%)
Length = 859
Score = 63.9 bits (32), Expect = 1e-09
Identities = 122/152 (80%)
Strand = Plus / Plus
Query: 1 atgggaagagggaagattgtgattcaaaggatcgacaactccacgagcaggcaagtgact 60
||||| ||||||||||||||||| ||||||||||| || |||||||||||||||||
Sbjct: 66 atggggagagggaagattgtgataaggaggatcgacaattcgacgagcaggcaagtgaca 125
Query: 61 ttctcaaagaggagaaagggattgatcaagaaagccaaagagttagccatcctctgtgat 120
|| || ||| |||| || || ||| | ||||| || || ||| | || ||| | ||||||
Sbjct: 126 ttttcgaagcggaggaatggtttgctgaagaaggcgaaggagcttgcgatcttgtgtgat 185
Query: 121 gcccaagttggacttgtcatattctccagcac 152
|| | |||||| |||| || |||||||||||
Sbjct: 186 gctgaggttggagttgtgatcttctccagcac 217
>gnl|LJGI|FS333501 similar to UniRef100_A7NUI9 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (67%)
Length = 550
Score = 63.9 bits (32), Expect = 1e-09
Identities = 122/152 (80%)
Strand = Plus / Plus
Query: 1 atgggaagagggaagattgtgattcaaaggatcgacaactccacgagcaggcaagtgact 60
||||| ||||||||||||||||| ||||||||||| || |||||||||||||||||
Sbjct: 43 atggggagagggaagattgtgataaggaggatcgacaattcgacgagcaggcaagtgaca 102
Query: 61 ttctcaaagaggagaaagggattgatcaagaaagccaaagagttagccatcctctgtgat 120
|| || ||| |||| || || ||| | ||||| || || ||| | || ||| | ||||||
Sbjct: 103 ttttcgaagcggaggaatggtttgctgaagaaggcgaaggagcttgcgatcttgtgtgat 162
Query: 121 gcccaagttggacttgtcatattctccagcac 152
|| | |||||| |||| || |||||||||||
Sbjct: 163 gctgaggttggagttgtgatcttctccagcac 194
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 382 caactagaaatgagtctccaaggtgtccgcatgaaaaagga 422
||||||||||| ||||| || ||||||||||||||||||||
Sbjct: 457 caactagaaattagtcttcatggtgtccgcatgaaaaagga 497
>gnl|LJGI|DC595031 similar to UniRef100_A7NUI9 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (80%)
Length = 580
Score = 63.9 bits (32), Expect = 1e-09
Identities = 122/152 (80%)
Strand = Plus / Plus
Query: 1 atgggaagagggaagattgtgattcaaaggatcgacaactccacgagcaggcaagtgact 60
||||| ||||||||||||||||| ||||||||||| || |||||||||||||||||
Sbjct: 20 atggggagagggaagattgtgataaggaggatcgacaattcgacgagcaggcaagtgaca 79
Query: 61 ttctcaaagaggagaaagggattgatcaagaaagccaaagagttagccatcctctgtgat 120
|| || ||| |||| || || ||| | ||||| || || ||| | || ||| | ||||||
Sbjct: 80 ttttcgaagcggaggaatggtttgctgaagaaggcgaaggagcttgcgatcttgtgtgat 139
Query: 121 gcccaagttggacttgtcatattctccagcac 152
|| | |||||| |||| || |||||||||||
Sbjct: 140 gctgaggttggagttgtgatcttctccagcac 171
Score = 61.9 bits (31), Expect = 4e-09
Identities = 106/131 (80%)
Strand = Plus / Plus
Query: 382 caactagaaatgagtctccaaggtgtccgcatgaaaaaggaaaatactctgacagatgag 441
||||||||||| ||||| || |||||||||||||||||||| | | | | |||||
Sbjct: 404 caactagaaattagtcttcatggtgtccgcatgaaaaaggaccaacttttaatggatgaa 463
Query: 442 atccaagagctgaaccgaaagggaaacctcatacatcaggacaacatggagctttataag 501
|| ||||| || || |||||||||||||||||||| || || || |||| | ||||||
Sbjct: 464 atacaagaacttaatcgaaagggaaacctcatacaccaagaaaatgtggaattgtataag 523
Query: 502 aaggtaaacct 512
|||||||||||
Sbjct: 524 aaggtaaacct 534
>gnl|LJGI|FS335696 similar to UniRef100_Q67BK3 Cluster: AGL15; n=1; Glycine max|Rep:
AGL15 - Glycine max (Soybean), partial (66%)
Length = 772
Score = 58.0 bits (29), Expect = 6e-08
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 46 agcaggcaagtgactttctcaaagaggagaaagggattgatcaagaaagccaaagagtta 105
||||||||||| || ||||| |||||||||| || ||| ||||||| || || ||| ||
Sbjct: 308 agcaggcaagtcacattctccaagaggagaactgggttgctcaagaaggcaaaggagcta 367
Query: 106 gccatcctctgtgatgc 122
||||| |||||||||||
Sbjct: 368 gccattctctgtgatgc 384