Miyakogusa Predicted Gene

Lj2g3v1457550.4
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1457550.4 tr|G7KGK0|G7KGK0_MEDTR Kinesin-4 OS=Medicago
truncatula GN=MTR_5g031470 PE=3 SV=1,80.5,0,coiled-coil,NULL; P-loop
containing nucleoside triphosphate hydrolases,NULL;
KINESIN_MOTOR_DOMAIN2,K,CUFF.37165.4
         (3117 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP055643 weakly similar to UniRef100_A3UKV4 Cluster: Ca...   272   1e-71
gnl|LJGI|TC67895 similar to UniRef100_Q7Y1U0 Cluster: Kinesin-li...    54   5e-06

>gnl|LJGI|BP055643 weakly similar to UniRef100_A3UKV4 Cluster: Catechol siderophore ABC
            transporter, permease protein; n=1; Vibrio splendidus
            12B01|Rep: Catechol siderophore ABC transporter, permease
            protein - Vibrio splendidus 12B01, partial (6%)
          Length = 272

 Score =  272 bits (137), Expect = 1e-71
 Identities = 137/137 (100%)
 Strand = Plus / Minus

                                                                        
Query: 2981 tcacaaggaaatctgatccacctaaaatagtaagggttgggaggcctgctacaaagccag 3040
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272  tcacaaggaaatctgatccacctaaaatagtaagggttgggaggcctgctacaaagccag 213

                                                                        
Query: 3041 tcattgccacccaagctccattgtctcacaagagagctagcacaagtagagaccaggttc 3100
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212  tcattgccacccaagctccattgtctcacaagagagctagcacaagtagagaccaggttc 153

                             
Query: 3101 aaggaattaaagaaaga 3117
            |||||||||||||||||
Sbjct: 152  aaggaattaaagaaaga 136


>gnl|LJGI|TC67895 similar to UniRef100_Q7Y1U0 Cluster: Kinesin-like calmodulin binding
            protein; n=1; Gossypium hirsutum|Rep: Kinesin-like
            calmodulin binding protein - Gossypium hirsutum (Upland
            cotton) (Gossypium mexicanum), partial (11%)
          Length = 599

 Score = 54.0 bits (27), Expect = 5e-06
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1420 ggctacaatgtttgcatctttgcttatgggcaaacaggaacaggaaagacattcacaat 1478
            ||||| ||||||||||| ||||||||||| ||||| ||  | ||||||||||| |||||
Sbjct: 104  ggctataatgtttgcatatttgcttatggtcaaactggctctggaaagacatttacaat 162