Miyakogusa Predicted Gene

Lj2g3v1457490.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1457490.1 tr|D2V8Z4|D2V8Z4_NAEGR Predicted protein
OS=Naegleria gruberi GN=NAEGRDRAFT_31998 PE=4 SV=1,42.7,2e-16,23S RRNA
METHYLTRANSFERASE,NULL; RNA METHYLTRANSFERASE,NULL; seg,NULL; no
description,NULL,CUFF.37160.1
         (579 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AU088830 similar to UniRef100_A7R275 Cluster: Chromosom...   309   1e-83

>gnl|LJGI|AU088830 similar to UniRef100_A7R275 Cluster: Chromosome undetermined
           scaffold_406, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_406,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (41%)
          Length = 706

 Score =  309 bits (156), Expect = 1e-83
 Identities = 156/156 (100%)
 Strand = Plus / Plus

                                                                       
Query: 423 atttggagcatcagggctggccattgctgataaaaatatcataagtgacaaacagttcca 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6   atttggagcatcagggctggccattgctgataaaaatatcataagtgacaaacagttcca 65

                                                                       
Query: 483 actaatcagtgtgacagctgaaaagtgggttcctataatagaactcccggtagatagcat 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66  actaatcagtgtgacagctgaaaagtgggttcctataatagaactcccggtagatagcat 125

                                               
Query: 543 aaaggcgtacttacagaaaaagaagagagaaggata 578
           ||||||||||||||||||||||||||||||||||||
Sbjct: 126 aaaggcgtacttacagaaaaagaagagagaaggata 161