Miyakogusa Predicted Gene
- Lj2g3v1455360.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1455360.1 tr|Q8L692|Q8L692_MEDTR 1-Deoxy-D-xylulose
5-phosphate synthase 2 (Precursor) OS=Medicago truncatula
,83.59,0,DXP_synthase_N,Deoxyxylulose-5-phosphate synthase;
Transket_pyr,Transketolase-like, pyrimidine-bindi,CUFF.37132.1
(2136 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67900 similar to UniRef100_Q8L692 Cluster: 1-deoxy-D-... 1469 0.0
gnl|LJGI|TC71272 similar to UniRef100_Q8L692 Cluster: 1-deoxy-D-... 829 0.0
gnl|LJGI|TC62963 similar to UniRef100_Q8L692 Cluster: 1-deoxy-D-... 775 0.0
gnl|LJGI|TC58045 homologue to UniRef100_Q8L692 Cluster: 1-deoxy-... 547 e-154
gnl|LJGI|AV767242 similar to UniRef100_Q8L692 Cluster: 1-deoxy-D... 283 2e-75
gnl|LJGI|GO020915 similar to UniRef100_Q8L692 Cluster: 1-deoxy-D... 232 7e-60
gnl|LJGI|TC64910 similar to UniRef100_Q8L692 Cluster: 1-deoxy-D-... 194 2e-48
>gnl|LJGI|TC67900 similar to UniRef100_Q8L692 Cluster: 1-deoxy-D-xylulose 5-phosphate
synthase 2 precursor; n=1; Medicago truncatula|Rep:
1-deoxy-D-xylulose 5-phosphate synthase 2 precursor -
Medicago truncatula (Barrel medic), partial (32%)
Length = 824
Score = 1469 bits (741), Expect = 0.0
Identities = 747/749 (99%)
Strand = Plus / Plus
Query: 1 atggcttcctgtggcgccttccttaagccaaaccactctctgcttccatgccataaaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 atggcttcctgtggcgccttccttaagccaaaccactctctgcttccatgccataaaact 135
Query: 61 tcaagtccaaagcatgatagcataaaacagttctgtgtgagagcttcagctagtagcacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 tcaagtccaaagcatgatagcataaaacagttctgtgtgagagcttcagctagtagcacc 195
Query: 121 gatgatggggaaaggacaattataaggaaagagaaagatgagtggaagatcaaatactca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 gatgatggggaaaggacaattataaggaaagagaaagatgagtggaagatcaaatactca 255
Query: 181 agcaagaaaccagtaacccctttgctggacacaatcaactacccagctcatatgaagaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 agcaagaaaccagtaacccctttgctggacacaatcaactacccagctcatatgaagaat 315
Query: 241 ctttccacacaggatcttgaacaacttgctgcagagctaagggcagacattgtacacact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ctttccacacaggatcttgaacaacttgctgcagagctaagggcagacattgtacacact 375
Query: 301 gtttccaactctggtgggcatcttagctcaagcttaggagtagtggaattaacagtggct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gtttccaactctggtgggcatcttagctcaagcttaggagtagtggaattaacagtggct 435
Query: 361 ctgcatcatgttttcaacaccccagaagacaagattatatgggatgtggggcaccaggca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ctgcatcatgttttcaacaccccagaagacaagattatatgggatgtggggcaccaggca 495
Query: 421 tatgcacacaagattctcacaggtagaaggtctaggatgcccactattaggaaaaccttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tatgcacacaagattctcacaggtagaaggtctaggatgcccactattaggaaaaccttg 555
Query: 481 ggactagcaggctttcctaagagagacgaaagcgtacatgatgcttttgggacagggcat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ggactagcaggctttcctaagagagacgaaagcgtacatgatgcttttgggacagggcat 615
Query: 541 agttctacaagtatatctgctggtcttggcatggcagttgcaagggatatactaggaaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 agttctacaagtatatctgctggtcttggcatggcagttgcaagggatatactaggaaag 675
Query: 601 aataacagtgtcatctcagtgatcggagatggggcaatgaccgccggccaagcttatgaa 660
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 676 aacaacagtgtcatctcagtgatcggagatggggcaatgaccgctggccaagcttatgaa 735
Query: 661 gccctgaacaatgcaggattccttgactgtaacatgatagttatacttaacgacaacaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 gccctgaacaatgcaggattccttgactgtaacatgatagttatacttaacgacaacaag 795
Query: 721 caagtctctttaccaactgctacagttga 749
|||||||||||||||||||||||||||||
Sbjct: 796 caagtctctttaccaactgctacagttga 824
>gnl|LJGI|TC71272 similar to UniRef100_Q8L692 Cluster: 1-deoxy-D-xylulose 5-phosphate
synthase 2 precursor; n=1; Medicago truncatula|Rep:
1-deoxy-D-xylulose 5-phosphate synthase 2 precursor -
Medicago truncatula (Barrel medic), partial (16%)
Length = 963
Score = 829 bits (418), Expect = 0.0
Identities = 418/418 (100%)
Strand = Plus / Plus
Query: 1 atggcttcctgtggcgccttccttaagccaaaccactctctgcttccatgccataaaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 atggcttcctgtggcgccttccttaagccaaaccactctctgcttccatgccataaaact 135
Query: 61 tcaagtccaaagcatgatagcataaaacagttctgtgtgagagcttcagctagtagcacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 tcaagtccaaagcatgatagcataaaacagttctgtgtgagagcttcagctagtagcacc 195
Query: 121 gatgatggggaaaggacaattataaggaaagagaaagatgagtggaagatcaaatactca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 gatgatggggaaaggacaattataaggaaagagaaagatgagtggaagatcaaatactca 255
Query: 181 agcaagaaaccagtaacccctttgctggacacaatcaactacccagctcatatgaagaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 agcaagaaaccagtaacccctttgctggacacaatcaactacccagctcatatgaagaat 315
Query: 241 ctttccacacaggatcttgaacaacttgctgcagagctaagggcagacattgtacacact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ctttccacacaggatcttgaacaacttgctgcagagctaagggcagacattgtacacact 375
Query: 301 gtttccaactctggtgggcatcttagctcaagcttaggagtagtggaattaacagtggct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gtttccaactctggtgggcatcttagctcaagcttaggagtagtggaattaacagtggct 435
Query: 361 ctgcatcatgttttcaacaccccagaagacaagattatatgggatgtggggcaccagg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ctgcatcatgttttcaacaccccagaagacaagattatatgggatgtggggcaccagg 493
>gnl|LJGI|TC62963 similar to UniRef100_Q8L692 Cluster: 1-deoxy-D-xylulose 5-phosphate
synthase 2 precursor; n=1; Medicago truncatula|Rep:
1-deoxy-D-xylulose 5-phosphate synthase 2 precursor -
Medicago truncatula (Barrel medic), partial (17%)
Length = 702
Score = 775 bits (391), Expect = 0.0
Identities = 397/399 (99%)
Strand = Plus / Plus
Query: 1738 agagttgccattttaggatatggttctgcagttcaacaatgcttgcacgcagcacaaatt 1797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agagttgccattttaggatatggttctgcagttcaacaatgcttgcacgcagcacaaatt 60
Query: 1798 cttgaagaacatgacatttctgtgacagtcgctgatgcaaggttttgcaaacccttggat 1857
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctcgaagaacatgacatttctgtgacagtcgctgatgcaaggttttgcaaacccttggat 120
Query: 1858 attgatctcattaagctattggctaaggagcacgagtttgtcatcacagtggaagaaggt 1917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attgatctcattaagctattggctaaggagcacgagtttgtcatcacagtggaagaaggt 180
Query: 1918 tctatcggaggttttggatcacatgtttcacagttcctaagcatagctggcctcctggat 1977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tctatcggaggttttggatcacatgtttcacagttcctaagcatagctggcctcctggat 240
Query: 1978 ggaccgctgaagtggagagcaatgacacttcctgacagatacatagagcatggatcacca 2037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggaccgctgaagtggagagcaatgacacttcctgacagatacatagagcatggatcacca 300
Query: 2038 caagatcagatggatgaagcgggacttacatcaaagcacattgtagcaacagtcttgtct 2097
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 301 caagatcagatggatgaagcgggacttacatcaaagcatattgtagcaacagtcttgtct 360
Query: 2098 cttctggaaaggccaaaagaagctctcttattcaagtaa 2136
|||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cttctggaaaggccaaaagaagctctcttattcaagtaa 399
>gnl|LJGI|TC58045 homologue to UniRef100_Q8L692 Cluster: 1-deoxy-D-xylulose
5-phosphate synthase 2 precursor; n=1; Medicago
truncatula|Rep: 1-deoxy-D-xylulose 5-phosphate synthase
2 precursor - Medicago truncatula (Barrel medic),
partial (32%)
Length = 831
Score = 547 bits (276), Expect = e-154
Identities = 612/724 (84%)
Strand = Plus / Plus
Query: 66 tccaaagcatgatagcataaaacagttctgtgtgagagcttcagctagtagcaccgatga 125
|||||| |||| | ||| || |||||| ||||| ||||||||||| | | | | | |||
Sbjct: 99 tccaaaccatggttgcagaacacagttttgtgtaagagcttcagcaactggtgcaggtga 158
Query: 126 tggggaaaggacaattataaggaaagagaaagatgagtggaagatcaaatactcaagcaa 185
|||||||||||| ||||| | |||| | ||||||| |||| ||||||| | ||| || |
Sbjct: 159 tggggaaaggactattatgaagaaacaaaaagatgggtgggagatcaatttctctagtga 218
Query: 186 gaaaccagtaacccctttgctggacacaatcaactacccagctcatatgaagaatctttc 245
||||||| |||| || ||| |||| ||| | || ||||| | ||| |||||||| | ||
Sbjct: 219 gaaaccactaacacccttgttggatacagttaattaccctgttcacatgaagaacttgtc 278
Query: 246 cacacaggatcttgaacaacttgctgcagagctaagggcagacattgtacacactgtttc 305
||||||||||||||||||||| || |||||||| || | ||||||||||||| |||||||
Sbjct: 279 cacacaggatcttgaacaactggcagcagagctgagagtagacattgtacactctgtttc 338
Query: 306 caactctggtgggcatcttagctcaagcttaggagtagtggaattaacagtggctctgca 365
|| ||||||||||||||||||||||||| || || ||||| ||| |||||||||||||
Sbjct: 339 aaatactggtgggcatcttagctcaagcttgggggtggtggagttagcagtggctctgca 398
Query: 366 tcatgttttcaacaccccagaagacaagattatatgggatgtggggcaccaggcatatgc 425
|||||||||||| ||||| ||||||||||| ||||||||||| || || || ||||| |
Sbjct: 399 tcatgttttcaatacccctgaagacaagatcatatgggatgttggccatcaagcataccc 458
Query: 426 acacaagattctcacaggtagaaggtctaggatgcccactattaggaaaaccttgggact 485
|||||||||||||||||||||||||| | |||| ||| |||||||| || | || ||
Sbjct: 459 tcacaagattctcacaggtagaaggtcccgcatgcacacaattaggaagacatcagggct 518
Query: 486 agcaggctttcctaagagagacgaaagcgtacatgatgcttttgggacagggcatagttc 545
|||||||||||| || || || || ||| | ||||||||||||||| |||| || |||||
Sbjct: 519 agcaggctttccgaaaagggatgagagcattcatgatgcttttggggcaggacacagttc 578
Query: 546 tacaagtatatctgctggtcttggcatggcagttgcaagggatatactaggaaagaataa 605
|||||| ||||| |||||||||||||||||||||||||||||| || | ||||| || ||
Sbjct: 579 tacaagcatatcagctggtcttggcatggcagttgcaagggatctattgggaaataaaaa 638
Query: 606 cagtgtcatctcagtgatcggagatggggcaatgaccgccggccaagcttatgaagccct 665
|||||| || |||||||| |||||||| |||||||| || || || |||||||| ||| |
Sbjct: 639 cagtgtaatttcagtgattggagatggagcaatgactgcagggcaggcttatgaggccat 698
Query: 666 gaacaatgcaggattccttgactgtaacatgatagttatacttaacgacaacaagcaagt 725
||||||||||||||||||||| |||| |||||||| ||||||| || |||||||||||
Sbjct: 699 gaacaatgcaggattccttgatactaacttgatagttgtacttaatgataacaagcaagt 758
Query: 726 ctctttaccaactgctacagttgatggccctgcaactccagttggagccctcagtagtac 785
|||||| |||||||| ||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 759 ctctttgccaactgcaacacttgatggccctgcaactccagttggagccatcagtagtac 818
Query: 786 ttta 789
||||
Sbjct: 819 ttta 822
>gnl|LJGI|AV767242 similar to UniRef100_Q8L692 Cluster: 1-deoxy-D-xylulose 5-phosphate
synthase 2 precursor; n=1; Medicago truncatula|Rep:
1-deoxy-D-xylulose 5-phosphate synthase 2 precursor -
Medicago truncatula (Barrel medic), partial (15%)
Length = 319
Score = 283 bits (143), Expect = 2e-75
Identities = 275/319 (86%)
Strand = Plus / Plus
Query: 936 ttttgaggagcttggcttatactacatcggccctgtggatggtcacgacattgaaggtct 995
|||||||||||| || ||||||||||||||||||||||||||||| | |||||| | |
Sbjct: 1 ttttgaggagctcgggttatactacatcggccctgtggatggtcataatgttgaagattt 60
Query: 996 ggtcaccattcttgaaaaggtgaaggcaatgcctgtccctggtccaattttgattcatat 1055
||||||||| |||| || ||||| |||| ||||| ||| |||||| |||||||||||||
Sbjct: 61 agtcaccatttttgagaaagtgaaagcaacgcctgccccaggtccagttttgattcatat 120
Query: 1056 tgtaacagagaaagggaagggatacccaccagcagaagcagctgctgataaaatgcacgg 1115
||| ||||| ||||||||||||||||| ||||| |||| ||| | |||||||||||| ||
Sbjct: 121 tgtgacagaaaaagggaagggataccccccagctgaaggagcagatgataaaatgcatgg 180
Query: 1116 tgttgttaagtttgaaccagcaacaggccgtcagtttaagccaaaatcctctactttgtc 1175
|||||| |||||||| ||| ||| || || ||||||||||||||| |||| || | ||
Sbjct: 181 tgttgtgaagtttgatccaaaaacgggtcgccagtttaagccaaaaccctccacactttc 240
Query: 1176 atatacccagtactttgctgagtcgttgataaaggaagctgaaatagacaacaagatagt 1235
||| ||||||||||||||||| || |||||||||||||||||||| ||||||||||||||
Sbjct: 241 atacacccagtactttgctgaatctttgataaaggaagctgaaatcgacaacaagatagt 300
Query: 1236 agggattcacgccgcaatg 1254
|| |||||||| ||||||
Sbjct: 301 agctattcacgcagcaatg 319
>gnl|LJGI|GO020915 similar to UniRef100_Q8L692 Cluster: 1-deoxy-D-xylulose 5-phosphate
synthase 2 precursor; n=1; Medicago truncatula|Rep:
1-deoxy-D-xylulose 5-phosphate synthase 2 precursor -
Medicago truncatula (Barrel medic), partial (15%)
Length = 330
Score = 232 bits (117), Expect = 7e-60
Identities = 273/325 (84%)
Strand = Plus / Plus
Query: 258 tgaacaacttgctgcagagctaagggcagacattgtacacactgtttccaactctggtgg 317
|||| ||||||| ||||||||||| ||||| ||||||||||| | || ||| ||||||
Sbjct: 1 tgaaaaacttgcagcagagctaagagcagatcttgtacacactctgtcaaacattggtgg 60
Query: 318 gcatcttagctcaagcttaggagtagtggaattaacagtggctctgcatcatgttttcaa 377
|||||||||||||||||| || || |||||||||||||| ||||||||| |||||||||
Sbjct: 61 gcatcttagctcaagcttgggggtggtggaattaacagttgctctgcattatgttttcag 120
Query: 378 caccccagaagacaagattatatgggatgtggggcaccaggcatatgcacacaagattct 437
||||||||| |||||||| | |||||||| ||||| |||||||| || |||||||||||
Sbjct: 121 caccccagacgacaagatcctttgggatgttgggcatcaggcatacgcccacaagattct 180
Query: 438 cacaggtagaaggtctaggatgcccactattaggaaaaccttgggactagcaggctttcc 497
|||||||||||||| |||| ||| |||| || || | || |||||||| |||||
Sbjct: 181 tacaggtagaaggtcactaatgcacaccattaagatgacttcagggctagcaggttttcc 240
Query: 498 taagagagacgaaagcgtacatgatgcttttgggacagggcatagttctacaagtatatc 557
||| || || || ||| | |||||||||||||| ||| |||||||||||||| |||||
Sbjct: 241 taaaagggatgagagcattcatgatgcttttggagtaggacatagttctacaagcatatc 300
Query: 558 tgctggtcttggcatggcagttgca 582
||||||||| |||| ||||||||||
Sbjct: 301 tgctggtctgggcacggcagttgca 325
>gnl|LJGI|TC64910 similar to UniRef100_Q8L692 Cluster: 1-deoxy-D-xylulose 5-phosphate
synthase 2 precursor; n=1; Medicago truncatula|Rep:
1-deoxy-D-xylulose 5-phosphate synthase 2 precursor -
Medicago truncatula (Barrel medic), partial (17%)
Length = 654
Score = 194 bits (98), Expect = 2e-48
Identities = 245/294 (83%)
Strand = Plus / Plus
Query: 1828 gctgatgcaaggttttgcaaacccttggatattgatctcattaagctattggctaaggag 1887
|||||||| ||||| |||||||| ||||||| |||||||||||||||| | ||||| |||
Sbjct: 62 gctgatgctaggttctgcaaacctttggatactgatctcattaagctactagctaaagag 121
Query: 1888 cacgagtttgtcatcacagtggaagaaggttctatcggaggttttggatcacatgtttca 1947
|| || | | ||||||||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 122 catgaaatactaatcacagtggaggaaggttctattggaggctttggatcgcatgtttca 181
Query: 1948 cagttcctaagcatagctggcctcctggatggaccgctgaagtggagagcaatgacactt 2007
|| | | ||||| ||||||| || ||||||| || |||||||||||||| |||| |||
Sbjct: 182 caatacttaagcttagctgggatcttggatggtcctctgaagtggagagcgatgatgctt 241
Query: 2008 cctgacagatacatagagcatggatcaccacaagatcagatggatgaagcgggacttaca 2067
||||| || ||||| || ||||||||||| |||||||||| || ||||| || || ||
Sbjct: 242 cctgataggtacattgaccatggatcaccccaagatcagactgaagaagcaggtctatca 301
Query: 2068 tcaaagcacattgtagcaacagtcttgtctcttctggaaaggccaaaagaagct 2121
|||||||| |||| || || ||||||||| || ||||||| ||||||||||||
Sbjct: 302 tcaaagcaaattgccgccacggtcttgtcttttatggaaagaccaaaagaagct 355