Miyakogusa Predicted Gene

Lj2g3v1455180.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1455180.1 tr|A9U6F5|A9U6F5_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_103200,46.79,1e-17,seg,NULL;
coiled-coil,NULL,CUFF.37127.1
         (1767 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS333918 weakly similar to UniRef100_A7R174 Cluster: Ch...   349   4e-95
gnl|LJGI|BP030941 similar to UniRef100_A7R174 Cluster: Chromosom...   246   4e-64

>gnl|LJGI|FS333918 weakly similar to UniRef100_A7R174 Cluster: Chromosome undetermined
           scaffold_340, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_340,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (10%)
          Length = 241

 Score =  349 bits (176), Expect = 4e-95
 Identities = 220/241 (91%)
 Strand = Plus / Plus

                                                                       
Query: 50  ttgaatcctgcggcgtctggcgaacctggctcggcgactccacctactccaatttcgctc 109
           ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 1   ttgaatcctgcggcgtctggcaaacctggctcggcaactccacctactccaatttcgctc 60

                                                                       
Query: 110 ccttcctctcttccccttccgcttgggactccttcatctcaaccgatccttccaattcta 169
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ccttcctctcttccccttccgcttgggactccttcatctcaaccgatccttccaattcta 120

                                                                       
Query: 170 gggctcacatccaccttcaactccgcgtccgcgctctcctcttcgacaaagcctcctccg 229
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gggctcacatccaccttcaactccgcgtccgcgctctcctcttcgacaaagcctcctccg 180

                                                                       
Query: 230 nnnnnnnnnnnnnnnnnnnttcttcctccatctccctcctcaacccttccttcctccgct 289
                              |||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccaccaccaccaccaccacttcttcctccatctccctcctcaacccttccttcctccgct 240

            
Query: 290 t 290
           |
Sbjct: 241 t 241


>gnl|LJGI|BP030941 similar to UniRef100_A7R174 Cluster: Chromosome undetermined
            scaffold_340, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_340, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (6%)
          Length = 416

 Score =  246 bits (124), Expect = 4e-64
 Identities = 127/128 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1640 cgaacattggcatggttagagcccagcctgttaaggtggagggcttccaggaattgatgg 1699
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416  cgaacattggcatggttagagcccagcctgttaaggtggagggcttccaggaattgatgg 357

                                                                        
Query: 1700 gttccccttcttcaacaaagcttgattcagaggaaaatagactgacttcgcccagtagta 1759
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356  gttccccttcttcaaccaagcttgattcagaggaaaatagactgacttcgcccagtagta 297

                    
Query: 1760 aatagttt 1767
            ||||||||
Sbjct: 296  aatagttt 289