Miyakogusa Predicted Gene
- Lj2g3v1438510.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1438510.2 Non Chatacterized Hit- tr|F6I7I4|F6I7I4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,79.63,5e-18,MATE EFFLUX FAMILY PROTEIN,NULL; MULTIDRUG RESISTANCE
PROTEIN,NULL,CUFF.37101.2
(717 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73360 similar to UniRef100_A7R0I1 Cluster: Chromosome... 1148 0.0
gnl|LJGI|BP055219 similar to UniRef100_A7R0I1 Cluster: Chromosom... 351 4e-96
gnl|LJGI|GO025491 similar to UniRef100_A7Q9Z0 Cluster: Chromosom... 64 1e-09
>gnl|LJGI|TC73360 similar to UniRef100_A7R0I1 Cluster: Chromosome undetermined
scaffold_309, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_309,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (39%)
Length = 884
Score = 1148 bits (579), Expect = 0.0
Identities = 598/603 (99%), Gaps = 1/603 (0%)
Strand = Plus / Plus
Query: 116 agaatgctgaaattgcagtggatgctctgtccatatgcatgtcaataaatggcttggaaa 175
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaatgctgagattgccgtggatgctctgtccatatgcatgtcaataaatggcttggaaa 60
Query: 176 tgatgattcctctgtcattttttgctgcaacaggagtgagggtt-gcaaacgagctggga 234
|||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 61 tgatgattcctctggcgttttttgctgcaacaggagtgagggtttgcaaacgagctggga 120
Query: 235 gctgggaatggtaaaggagccaagtttgctactaaagtatctgtggtcacttcttcaata 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gctgggaatggtaaaggagccaagtttgctactaaagtatctgtggtcacttcttcaata 180
Query: 295 ataggactcttcttttggatgttgattttgatatttcacgataaaatcggctacatattc 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ataggactcttcttttggatgttgattttgatatttcacgataaaatcggctacatattc 240
Query: 355 tctacaagcaaacccgtccttgatgaagtaaacaatctttctcttctgttagccttcaca 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tctacaagcaaacccgtccttgatgaagtaaacaatctttctcttctgttagccttcaca 300
Query: 415 atactacttaacagtattcagccagttctctcaggagtggctgtgggatcagggtggcaa 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atactacttaacagtattcagccagttctctcaggagtggctgtgggatcagggtggcaa 360
Query: 475 tcatatgttgcatacataaatttgggttgctactatcttgttggggtgcctcttggattt 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcatatgttgcatacataaatttgggttgctactatcttgttggggtgcctcttggattt 420
Query: 535 ataatgggctgggtattcaatcaaggagttatgggaatttgggcggggatgatttttggt 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ataatgggctgggtattcaatcaaggagttatgggaatttgggcggggatgatttttggt 480
Query: 595 ggaacagcacttcagacattgatattaggcgtgattaccattcgatgcgattgggatgga 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggaacagcacttcagacattgatattaggcgtgattaccattcgatgcgattgggatgga 540
Query: 655 gaggcagagaaagcaaaattgcatttgacaaagtggtcagattcaaaacgagaactgaac 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaggcagagaaagcaaaattgcatttgacaaagtggtcagattcaaaacgagaactgaac 600
Query: 715 tag 717
|||
Sbjct: 601 tag 603
>gnl|LJGI|BP055219 similar to UniRef100_A7R0I1 Cluster: Chromosome undetermined
scaffold_309, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_309,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (16%)
Length = 527
Score = 351 bits (177), Expect = 4e-96
Identities = 198/205 (96%)
Strand = Plus / Minus
Query: 5 aagctttttctggtctttgggagtttgttaaactttcagctgcttctggagtcatgctct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 aagctttttctggtctttgggagtttgttaaactttcagctgcttctggagtcatgctct 440
Query: 65 gtgtggagaattggtattataaagttctgatattgatgactggaaatcttcagaatgctg 124
|||||||||||||||||| || |||||||||| |||||||||||||||||||||| ||||
Sbjct: 439 gtgtggagaattggtattgtagagttctgatagtgatgactggaaatcttcagaacgctg 380
Query: 125 aaattgcagtggatgctctgtccatatgcatgtcaataaatggcttggaaatgatgattc 184
| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 agattgccgtggatgctttgtccatatgcatgtcaataaatggcttggaaatgatgattc 320
Query: 185 ctctgtcattttttgctgcaacagg 209
|||||||||||||||||||||||||
Sbjct: 319 ctctgtcattttttgctgcaacagg 295
>gnl|LJGI|GO025491 similar to UniRef100_A7Q9Z0 Cluster: Chromosome chr8 scaffold_68,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_68, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 601
Score = 63.9 bits (32), Expect = 1e-09
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 415 atactacttaacagtattcagccagttctctcaggagtggctgtgggatcagggtggcaa 474
||||| ||||||||| | || ||||| ||||||||||| ||||||||| |||||||||||
Sbjct: 283 atacttcttaacagtgtccaaccagtgctctcaggagttgctgtgggagcagggtggcaa 342