Miyakogusa Predicted Gene
- Lj2g3v1438510.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1438510.1 Non Chatacterized Hit- tr|I1J529|I1J529_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,87.04,0,MatE,Multi antimicrobial extrusion protein; matE: MATE
efflux family protein,Multi antimicrobial ext,CUFF.37101.1
(1299 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73360 similar to UniRef100_A7R0I1 Cluster: Chromosome... 1179 0.0
gnl|LJGI|TC59080 similar to UniRef100_A7R0I1 Cluster: Chromosome... 983 0.0
gnl|LJGI|BP055219 similar to UniRef100_A7R0I1 Cluster: Chromosom... 375 e-103
gnl|LJGI|FS318265 similar to UniRef100_A7Q9Z0 Cluster: Chromosom... 68 1e-10
gnl|LJGI|FS320482 similar to UniRef100_A7Q9Z0 Cluster: Chromosom... 68 1e-10
gnl|LJGI|GO025491 similar to UniRef100_A7Q9Z0 Cluster: Chromosom... 64 2e-09
gnl|LJGI|TC66299 similar to UniRef100_A7NUS6 Cluster: Chromosome... 56 6e-07
>gnl|LJGI|TC73360 similar to UniRef100_A7R0I1 Cluster: Chromosome undetermined
scaffold_309, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_309, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(39%)
Length = 884
Score = 1179 bits (595), Expect = 0.0
Identities = 602/603 (99%), Gaps = 1/603 (0%)
Strand = Plus / Plus
Query: 698 agaatgctgagattgccgtggatgctctgtccatatgcatgtcaataaatggcttggaaa 757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaatgctgagattgccgtggatgctctgtccatatgcatgtcaataaatggcttggaaa 60
Query: 758 tgatgattcctctggcgttttttgctgcaacaggagtgagggtt-gcaaacgagctggga 816
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 61 tgatgattcctctggcgttttttgctgcaacaggagtgagggtttgcaaacgagctggga 120
Query: 817 gctgggaatggtaaaggagccaagtttgctactaaagtatctgtggtcacttcttcaata 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gctgggaatggtaaaggagccaagtttgctactaaagtatctgtggtcacttcttcaata 180
Query: 877 ataggactcttcttttggatgttgattttgatatttcacgataaaatcggctacatattc 936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ataggactcttcttttggatgttgattttgatatttcacgataaaatcggctacatattc 240
Query: 937 tctacaagcaaacccgtccttgatgaagtaaacaatctttctcttctgttagccttcaca 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tctacaagcaaacccgtccttgatgaagtaaacaatctttctcttctgttagccttcaca 300
Query: 997 atactacttaacagtattcagccagttctctcaggagtggctgtgggatcagggtggcaa 1056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atactacttaacagtattcagccagttctctcaggagtggctgtgggatcagggtggcaa 360
Query: 1057 tcatatgttgcatacataaatttgggttgctactatcttgttggggtgcctcttggattt 1116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcatatgttgcatacataaatttgggttgctactatcttgttggggtgcctcttggattt 420
Query: 1117 ataatgggctgggtattcaatcaaggagttatgggaatttgggcggggatgatttttggt 1176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ataatgggctgggtattcaatcaaggagttatgggaatttgggcggggatgatttttggt 480
Query: 1177 ggaacagcacttcagacattgatattaggcgtgattaccattcgatgcgattgggatgga 1236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggaacagcacttcagacattgatattaggcgtgattaccattcgatgcgattgggatgga 540
Query: 1237 gaggcagagaaagcaaaattgcatttgacaaagtggtcagattcaaaacgagaactgaac 1296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaggcagagaaagcaaaattgcatttgacaaagtggtcagattcaaaacgagaactgaac 600
Query: 1297 tag 1299
|||
Sbjct: 601 tag 603
>gnl|LJGI|TC59080 similar to UniRef100_A7R0I1 Cluster: Chromosome undetermined
scaffold_309, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_309,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (39%)
Length = 787
Score = 983 bits (496), Expect = 0.0
Identities = 496/496 (100%)
Strand = Plus / Plus
Query: 1 atgttagtgatcacccaagcctttgcaggccacctaggtgaccttgaactcgcagctatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 atgttagtgatcacccaagcctttgcaggccacctaggtgaccttgaactcgcagctatc 351
Query: 61 tccatcgccaataatgttgtcgtcggcttcgactttggcctcttgttgggcatggcaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 tccatcgccaataatgttgtcgtcggcttcgactttggcctcttgttgggcatggcaagt 411
Query: 121 gcgttggaaacactatgcgggcaagcttatggggccaaaaagtactacatgttaggcgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 gcgttggaaacactatgcgggcaagcttatggggccaaaaagtactacatgttaggcgtg 471
Query: 181 tacatgcagcgttcttggattgttcttttcatttgttgcatcttccttttgcctatctac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 tacatgcagcgttcttggattgttcttttcatttgttgcatcttccttttgcctatctac 531
Query: 241 ctgtttgcctcgccggttttgaagttgttggggcagcctgatgatctggcagagctttcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 ctgtttgcctcgccggttttgaagttgttggggcagcctgatgatctggcagagctttcc 591
Query: 301 ggtgtggcatcaatgtggatgataccgctgcacttctccttcgcgttccagtttcctctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 ggtgtggcatcaatgtggatgataccgctgcacttctccttcgcgttccagtttcctctc 651
Query: 361 cagaggttcttgcagagccagcttaaaaccgctgcaattgcctgggcatctctagtggcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 cagaggttcttgcagagccagcttaaaaccgctgcaattgcctgggcatctctagtggcg 711
Query: 421 cttttggtgcacgtgtttatcagttggttatttgttttcaagcttcagtttggtttgatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 cttttggtgcacgtgtttatcagttggttatttgttttcaagcttcagtttggtttgatt 771
Query: 481 ggcattgctgctacca 496
||||||||||||||||
Sbjct: 772 ggcattgctgctacca 787
>gnl|LJGI|BP055219 similar to UniRef100_A7R0I1 Cluster: Chromosome undetermined
scaffold_309, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_309,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (16%)
Length = 527
Score = 375 bits (189), Expect = e-103
Identities = 222/233 (95%)
Strand = Plus / Minus
Query: 559 cctcacacgtggcctggtttgtccatggaagctttttctggtctttgggagtttgttaaa 618
|||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 527 cctcacacgtggtctggattgtctatggaagctttttctggtctttgggagtttgttaaa 468
Query: 619 ctttctgctgcttctggagtcatgctctgtgtggagaattggtattatagagttctgata 678
||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 467 ctttcagctgcttctggagtcatgctctgtgtggagaattggtattgtagagttctgata 408
Query: 679 ttgatgactggaaatcttaagaatgctgagattgccgtggatgctctgtccatatgcatg 738
||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 407 gtgatgactggaaatcttcagaacgctgagattgccgtggatgctttgtccatatgcatg 348
Query: 739 tcaataaatggcttggaaatgatgattcctctggcgttttttgctgcaacagg 791
||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 347 tcaataaatggcttggaaatgatgattcctctgtcattttttgctgcaacagg 295
>gnl|LJGI|FS318265 similar to UniRef100_A7Q9Z0 Cluster: Chromosome chr8 scaffold_68,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_68, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 772
Score = 67.9 bits (34), Expect = 1e-10
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 107 tgggcatggcaagtgcgttggaaacactatgcgggcaagcttatggggccaaaa 160
|||||||||||||||| ||||||| ||||| |||||||| |||||||||||||
Sbjct: 329 tgggcatggcaagtgcactggaaactctatgtgggcaagcatatggggccaaaa 382
>gnl|LJGI|FS320482 similar to UniRef100_A7Q9Z0 Cluster: Chromosome chr8 scaffold_68,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_68, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 735
Score = 67.9 bits (34), Expect = 1e-10
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 107 tgggcatggcaagtgcgttggaaacactatgcgggcaagcttatggggccaaaa 160
|||||||||||||||| ||||||| ||||| |||||||| |||||||||||||
Sbjct: 392 tgggcatggcaagtgcactggaaactctatgtgggcaagcatatggggccaaaa 445
>gnl|LJGI|GO025491 similar to UniRef100_A7Q9Z0 Cluster: Chromosome chr8 scaffold_68,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_68, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 601
Score = 63.9 bits (32), Expect = 2e-09
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 997 atactacttaacagtattcagccagttctctcaggagtggctgtgggatcagggtggcaa 1056
||||| ||||||||| | || ||||| ||||||||||| ||||||||| |||||||||||
Sbjct: 283 atacttcttaacagtgtccaaccagtgctctcaggagttgctgtgggagcagggtggcaa 342
>gnl|LJGI|TC66299 similar to UniRef100_A7NUS6 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 712
Score = 56.0 bits (28), Expect = 6e-07
Identities = 109/136 (80%)
Strand = Plus / Plus
Query: 11 tcacccaagcctttgcaggccacctaggtgaccttgaactcgcagctatctccatcgcca 70
|||| |||||||| || |||||||| || ||| | ||||||| || |||||||||||||
Sbjct: 313 tcactcaagccttcgccggccacctcggcgacgtccaactcgccgccatctccatcgcca 372
Query: 71 ataatgttgtcgtcggcttcgactttggcctcttgttgggcatggcaagtgcgttggaaa 130
| | || |||| ||||| | || |||||| | ||||| ||||||||||||||||| |
Sbjct: 373 acaccgtcatcgttggctttaatttcggcctcctattggggatggcaagtgcgttggaga 432
Query: 131 cactatgcgggcaagc 146
| || ||||| |||||
Sbjct: 433 cgctgtgcggtcaagc 448