Miyakogusa Predicted Gene

Lj2g3v1436930.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1436930.2 tr|G7KHW4|G7KHW4_MEDTR Cyclic nucleotide gated
channel OS=Medicago truncatula GN=MTR_6g072050 PE=4
S,70,3e-19,Voltage-gated potassium channels,NULL; seg,NULL; CYCLIC
NUCLEOTIDE GATED CHANNEL,NULL; VOLTAGE AND L,CUFF.37064.2
         (279 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC600059                                                      96   1e-19
gnl|LJGI|TC71454 similar to UniRef100_A7PPK3 Cluster: Chromosome...    52   2e-06

>gnl|LJGI|DC600059 
          Length = 572

 Score = 95.6 bits (48), Expect = 1e-19
 Identities = 48/48 (100%)
 Strand = Plus / Plus

                                                           
Query: 1   atggaaaactatcttaaccttatgcagcaaatcagtactatagctggt 48
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 atggaaaactatcttaaccttatgcagcaaatcagtactatagctggt 572


>gnl|LJGI|TC71454 similar to UniRef100_A7PPK3 Cluster: Chromosome chr8 scaffold_23,
          whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
          Chromosome chr8 scaffold_23, whole genome shotgun
          sequence - Vitis vinifera (Grape), partial (8%)
          Length = 580

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                    
Query: 1  atggaaaactatcttaaccttatgca 26
          ||||||||||||||||||||||||||
Sbjct: 26 atggaaaactatcttaaccttatgca 1