Miyakogusa Predicted Gene

Lj2g3v1436870.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1436870.1 Non Chatacterized Hit- tr|D8T1S9|D8T1S9_SELML
Putative uncharacterized protein OS=Selaginella moelle,31.91,4e-18,A
Receptor for Ubiquitination Targets,F-box domain, cyclin-like; no
description,NULL; SUBFAMILY NOT ,CUFF.37047.1
         (721 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW611834 weakly similar to UniRef100_A7QRJ5 Cluster: Ch...   890   0.0  

>gnl|LJGI|BW611834 weakly similar to UniRef100_A7QRJ5 Cluster: Chromosome chr8
           scaffold_150, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr8 scaffold_150, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (17%)
          Length = 487

 Score =  890 bits (449), Expect = 0.0
 Identities = 469/478 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcgcaacaagttctgagaaaggcacacaaccccaacgattgttttcccatagaatgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10  atggcgcaacaagttctgagaaaggcacacaaccccaacgattgttttcccatagaatgc 69

                                                                       
Query: 61  gcagagcttgtcctaccatatctcacaccaccagagctcgccaacgtctctatgacctgc 120
           |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||
Sbjct: 70  gcagagcttgtcctaccatggctcacaccaccagagctcgccaacgtctctatgacctgc 129

                                                                       
Query: 121 aaatccctccgccaagtctcccactccatcactctccgccgttcctccgacgcttctaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 aaatccctccgccaagtctcccactccatcactctccgccgttcctccgacgcttctaga 189

                                                                       
Query: 181 agcttcgagaactttccagtcccctttctcaacaccacctaccctccttacgcccacttc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 agcttcgagaactttccagtcccctttctcaacaccacctaccctccttacgcccacttc 249

                                                                       
Query: 241 atctacactccttccctccttctctcctctcaacacctccctcgccaaccgtnnnnnnnc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||       |
Sbjct: 250 atctacactccttccctccttctctcctctcaacacctccctcgccaaccgtgggggggc 309

                                                                       
Query: 301 aggtccgtaatttcacctgctcccgcgctgagtgcggaatcggtgagtttggtggacgag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 aggtccgtaatttcacctgctcccgcgctgagtgcggaatcggtgagtttggtggacgag 369

                                                                       
Query: 361 tcgggccgggtagtgtcggggtgtgactgccgcgatgcctgttcggattgtccgtgttct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tcgggccgggtagtgtcggggtgtgactgccgcgatgcctgttcggattgtccgtgttct 429

                                                                     
Query: 421 tgcttggacgggcttgatgtaggccgcgagtgcggaccgggttgccggtgcggaccag 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tgcttggacgggcttgatgtaggccgcgagtgcggaccgggttgccggtgcggaccag 487