Miyakogusa Predicted Gene
- Lj2g3v1414970.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1414970.1 tr|G7K086|G7K086_MEDTR Axial regulator YABBY
OS=Medicago truncatula GN=MTR_5g034030 PE=4 SV=1,86.18,0,SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; YABBY,YABBY protein,CUFF.36981.1
(651 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74765 similar to UniRef100_A7QVD4 Cluster: Chromosome... 66 3e-10
gnl|LJGI|TC71034 similar to UniRef100_A7QVD4 Cluster: Chromosome... 66 3e-10
gnl|LJGI|BP041062 homologue to UniRef100_Q6SS00 Cluster: YABBY-l... 56 3e-07
gnl|LJGI|TC74663 homologue to UniRef100_A7QVD4 Cluster: Chromoso... 52 4e-06
>gnl|LJGI|TC74765 similar to UniRef100_A7QVD4 Cluster: Chromosome chr2 scaffold_187,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_187, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (84%)
Length = 742
Score = 65.9 bits (33), Expect = 3e-10
Identities = 105/129 (81%)
Strand = Plus / Plus
Query: 346 ccagagaagagacagagaacaccatcagcttataaccgcttcatcaaagaagagattaaa 405
|||||||||||||||||| || ||||| || ||||||||||| || || ||||| ||
Sbjct: 568 ccagagaagagacagagagttccctcagcatacaaccgcttcattaaggacgagatccaa 627
Query: 406 aggctcaaggctgaaaatcctgacatggctcacaaagaagctttcagtacagctgctaaa 465
| ||||| ||| |||||||| || |||||| ||||| |||||| |||||||||||
Sbjct: 628 cgcatcaagtctgtcaatcctgatattactcacagggaagccttcagtgcagctgctaaa 687
Query: 466 aattgggcc 474
|||||||||
Sbjct: 688 aattgggcc 696
>gnl|LJGI|TC71034 similar to UniRef100_A7QVD4 Cluster: Chromosome chr2 scaffold_187,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_187, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (84%)
Length = 896
Score = 65.9 bits (33), Expect = 3e-10
Identities = 105/129 (81%)
Strand = Plus / Plus
Query: 346 ccagagaagagacagagaacaccatcagcttataaccgcttcatcaaagaagagattaaa 405
|||||||||||||||||| || ||||| || ||||||||||| || || ||||| ||
Sbjct: 400 ccagagaagagacagagagttccctcagcatacaaccgcttcattaaggacgagatccaa 459
Query: 406 aggctcaaggctgaaaatcctgacatggctcacaaagaagctttcagtacagctgctaaa 465
| ||||| ||| |||||||| || |||||| ||||| |||||| |||||||||||
Sbjct: 460 cgcatcaagtctgtcaatcctgatattactcacagggaagccttcagtgcagctgctaaa 519
Query: 466 aattgggcc 474
|||||||||
Sbjct: 520 aattgggcc 528
>gnl|LJGI|BP041062 homologue to UniRef100_Q6SS00 Cluster: YABBY-like transcription
factor GRAMINIFOLIA; n=1; Antirrhinum majus|Rep:
YABBY-like transcription factor GRAMINIFOLIA -
Antirrhinum majus (Garden snapdragon), partial (46%)
Length = 550
Score = 56.0 bits (28), Expect = 3e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 346 ccagagaagagacagagaacaccatcagcttataaccgcttcatcaaagaagagat 401
|||||||||||||||||| ||||| ||||| |||||||||||||| || |||||
Sbjct: 421 ccagagaagagacagagagttccatctgcttacaaccgcttcatcaaggatgagat 366
>gnl|LJGI|TC74663 homologue to UniRef100_A7QVD4 Cluster: Chromosome chr2
scaffold_187, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr2 scaffold_187, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (38%)
Length = 675
Score = 52.0 bits (26), Expect = 4e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 421 aatcctgacatggctcacaaagaagctttcagtacagctgctaaaaattgggcc 474
|||||||| || |||||| ||||| |||||| ||||||||||||||||||||
Sbjct: 313 aatcctgatattactcacagggaagccttcagtgcagctgctaaaaattgggcc 366