Miyakogusa Predicted Gene

Lj2g3v1414880.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1414880.2 Non Chatacterized Hit- tr|K3Y2U2|K3Y2U2_SETIT
Uncharacterized protein OS=Setaria italica GN=Si008523,31.9,8e-17,
,CUFF.36978.2
         (744 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS323494 weakly similar to UniRef100_O22692 Cluster: F8...   700   0.0  
gnl|LJGI|FS349949 weakly similar to UniRef100_O22692 Cluster: F8...   180   8e-45

>gnl|LJGI|FS323494 weakly similar to UniRef100_O22692 Cluster: F8A5.1 protein; n=1;
           Arabidopsis thaliana|Rep: F8A5.1 protein - Arabidopsis
           thaliana (Mouse-ear cress), partial (11%)
          Length = 782

 Score =  700 bits (353), Expect = 0.0
 Identities = 400/421 (95%), Gaps = 21/421 (4%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaaaaacggtgctatattcagtggtactgaagtttgtctgtctcctattattagcctt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 atgaaaaacggtgctatattcagtggtactgaagtttgtctgtctcctattattagcctt 421

                                                                       
Query: 61  gatctcttggtggctgaaattcatagctttgtacagaaga-------------------- 100
           ||||||||||||||||||||||||||||||||||||||||                    
Sbjct: 422 gatctcttggtggctgaaattcatagctttgtacagaagatgctagttctaaggattcct 481

                                                                       
Query: 101 -atgttgcaattcaattagtagcagaagattgtgatgtacttggatcaagatatgaaaag 159
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 aatgttgcaattcaattagtagcagaagattgtgatgtacttggatcaagatatgaaaag 541

                                                                       
Query: 160 gtttttcctgcaaatatgtgcaacgacttatctatcccagcagcaaatcttgaacgtctt 219
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gtttttcctgcaaatatgtgcaacgacttatctatcccagcagcaaatcttgaacgtctt 601

                                                                       
Query: 220 atgtcaggcctcgaagactatgtacttaagcatggaaataatttaagtgacaagtgtaat 279
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 atgtcaggcctcgaagactatgtacttaagcatggaaataatttaagtgacaagtgtaat 661

                                                                       
Query: 280 tcttgcttcccaagttgggagacgctcaaagttgggagcggggtagtctgctgtactgaa 339
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tcttgcttcccaagttgggagacgctcaaagttgggagcggggtagtctgctgtactgaa 721

                                                                       
Query: 340 aatcgtctacacactgaactggtgatggaggcagttataatattaagtaacatatcaatt 399
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 aatcgtctacacactgaactggtgatggaggcagttataatattaagtaacatatcaatt 781

            
Query: 400 c 400
           |
Sbjct: 782 c 782


>gnl|LJGI|FS349949 weakly similar to UniRef100_O22692 Cluster: F8A5.1 protein; n=1;
           Arabidopsis thaliana|Rep: F8A5.1 protein - Arabidopsis
           thaliana (Mouse-ear cress), partial (15%)
          Length = 753

 Score =  180 bits (91), Expect = 8e-45
 Identities = 91/91 (100%)
 Strand = Plus / Minus

                                                                       
Query: 545 tagtagagaaagatggctttgcaatactagaatgggaaaacttgccttcagatactcata 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 tagtagagaaagatggctttgcaatactagaatgggaaaacttgccttcagatactcata 694

                                          
Query: 605 tcgatatagtgctccattcatatcataaaca 635
           |||||||||||||||||||||||||||||||
Sbjct: 693 tcgatatagtgctccattcatatcataaaca 663