Miyakogusa Predicted Gene

Lj2g3v1414880.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1414880.1 tr|Q0D9M7|Q0D9M7_ORYSJ Os06g0708200 protein
OS=Oryza sativa subsp. japonica GN=Os06g0708200 PE=4
SV=,45.45,0.000000002,seg,NULL,CUFF.36978.1
         (1098 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS323494 weakly similar to UniRef100_O22692 Cluster: F8...  1495   0.0  
gnl|LJGI|FS349949 weakly similar to UniRef100_O22692 Cluster: F8...   180   1e-44

>gnl|LJGI|FS323494 weakly similar to UniRef100_O22692 Cluster: F8A5.1 protein; n=1;
           Arabidopsis thaliana|Rep: F8A5.1 protein - Arabidopsis
           thaliana (Mouse-ear cress), partial (11%)
          Length = 782

 Score = 1495 bits (754), Expect = 0.0
 Identities = 754/754 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagttctcttcggttcagaaactctgcttacacttgatttccttagcataccggaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29  atggagttctcttcggttcagaaactctgcttacacttgatttccttagcataccggaga 88

                                                                       
Query: 61  tgccgattatcggagcagatttgcagactctccgtcattctcactcgctcttcatcttcg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89  tgccgattatcggagcagatttgcagactctccgtcattctcactcgctcttcatcttcg 148

                                                                       
Query: 121 cttccctctctccgaatttcaatctctgatactggcattggaagctgcttagaggagttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 cttccctctctccgaatttcaatctctgatactggcattggaagctgcttagaggagttt 208

                                                                       
Query: 181 caggagttgaggttttcttccacagatgttgctgacaattgggatggggtgctttctatc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 caggagttgaggttttcttccacagatgttgctgacaattgggatggggtgctttctatc 268

                                                                       
Query: 241 aaaaccaccagcattagtgatacagagatatataattatcagataaatctgaaaggaagt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 aaaaccaccagcattagtgatacagagatatataattatcagataaatctgaaaggaagt 328

                                                                       
Query: 301 ggttcctccagaataacaagactaccttctgacatgaaaaacggtgctatattcagtggt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ggttcctccagaataacaagactaccttctgacatgaaaaacggtgctatattcagtggt 388

                                                                       
Query: 361 actgaagtttgtctgtctcctattattagccttgatctcttggtggctgaaattcatagc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 actgaagtttgtctgtctcctattattagccttgatctcttggtggctgaaattcatagc 448

                                                                       
Query: 421 tttgtacagaagatgctagttctaaggattcctaatgttgcaattcaattagtagcagaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tttgtacagaagatgctagttctaaggattcctaatgttgcaattcaattagtagcagaa 508

                                                                       
Query: 481 gattgtgatgtacttggatcaagatatgaaaaggtttttcctgcaaatatgtgcaacgac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gattgtgatgtacttggatcaagatatgaaaaggtttttcctgcaaatatgtgcaacgac 568

                                                                       
Query: 541 ttatctatcccagcagcaaatcttgaacgtcttatgtcaggcctcgaagactatgtactt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ttatctatcccagcagcaaatcttgaacgtcttatgtcaggcctcgaagactatgtactt 628

                                                                       
Query: 601 aagcatggaaataatttaagtgacaagtgtaattcttgcttcccaagttgggagacgctc 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 aagcatggaaataatttaagtgacaagtgtaattcttgcttcccaagttgggagacgctc 688

                                                                       
Query: 661 aaagttgggagcggggtagtctgctgtactgaaaatcgtctacacactgaactggtgatg 720
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 aaagttgggagcggggtagtctgctgtactgaaaatcgtctacacactgaactggtgatg 748

                                             
Query: 721 gaggcagttataatattaagtaacatatcaattc 754
           ||||||||||||||||||||||||||||||||||
Sbjct: 749 gaggcagttataatattaagtaacatatcaattc 782


>gnl|LJGI|FS349949 weakly similar to UniRef100_O22692 Cluster: F8A5.1 protein; n=1;
           Arabidopsis thaliana|Rep: F8A5.1 protein - Arabidopsis
           thaliana (Mouse-ear cress), partial (15%)
          Length = 753

 Score =  180 bits (91), Expect = 1e-44
 Identities = 91/91 (100%)
 Strand = Plus / Minus

                                                                       
Query: 899 tagtagagaaagatggctttgcaatactagaatgggaaaacttgccttcagatactcata 958
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 tagtagagaaagatggctttgcaatactagaatgggaaaacttgccttcagatactcata 694

                                          
Query: 959 tcgatatagtgctccattcatatcataaaca 989
           |||||||||||||||||||||||||||||||
Sbjct: 693 tcgatatagtgctccattcatatcataaaca 663