Miyakogusa Predicted Gene

Lj2g3v1402700.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1402700.1 tr|A9U357|A9U357_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_101176,43.48,0.0000003,seg,NULL; DUF936,Protein of
unknown function DUF936, plant; FAMILY NOT NAMED,NULL,CUFF.36965.1
         (1257 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO024039 similar to UniRef100_A7Q2C2 Cluster: Chromosom...   216   3e-55

>gnl|LJGI|GO024039 similar to UniRef100_A7Q2C2 Cluster: Chromosome chr1 scaffold_46,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr1 scaffold_46, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (21%)
          Length = 607

 Score =  216 bits (109), Expect = 3e-55
 Identities = 109/109 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1028 gagaagtggctcaaaagattgcccttcaagcattaagagatgcttcagctactgaggcag 1087
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    gagaagtggctcaaaagattgcccttcaagcattaagagatgcttcagctactgaggcag 60

                                                             
Query: 1088 tagttcgttccctcaagatgttctcaaatttatgcaaatcagctcgagc 1136
            |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   tagttcgttccctcaagatgttctcaaatttatgcaaatcagctcgagc 109



 Score =  155 bits (78), Expect = 8e-37
 Identities = 78/78 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1180 gagccgatgctcctgctgcctgttttgaacggtttttggagttccataaagatattgtac 1239
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106  gagccgatgctcctgctgcctgttttgaacggtttttggagttccataaagatattgtac 165

                              
Query: 1240 aatcagttagtgaaatga 1257
            ||||||||||||||||||
Sbjct: 166  aatcagttagtgaaatga 183