Miyakogusa Predicted Gene
- Lj2g3v1391610.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1391610.1 tr|C1MSP2|C1MSP2_MICPC Predicted protein
OS=Micromonas pusilla (strain CCMP1545)
GN=MICPUCDRAFT_5776,47.42,1e-17,RRM,RNA recognition motif domain;
seg,NULL; no description,Nucleotide-binding, alpha-beta plait;
coi,CUFF.36966.1
(1983 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW627085 813 0.0
gnl|LJGI|TC79312 611 e-174
gnl|LJGI|TC70330 similar to UniRef100_A7Q2D0 Cluster: Chromosome... 494 e-138
gnl|LJGI|BP065554 200 2e-50
>gnl|LJGI|BW627085
Length = 474
Score = 813 bits (410), Expect = 0.0
Identities = 410/410 (100%)
Strand = Plus / Plus
Query: 1115 tgatagaggagaggttgatgacaagacctttgcctccaccacctgcactgccaaccgtcg 1174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgatagaggagaggttgatgacaagacctttgcctccaccacctgcactgccaaccgtcg 60
Query: 1175 atggttctgtgagttcagttcaagaacaacctgctaagacaagagatggagagtctgatg 1234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atggttctgtgagttcagttcaagaacaacctgctaagacaagagatggagagtctgatg 120
Query: 1235 tggatacgaagaagaatgaaacaggtgaagataaaaatgataaagaggcaaacagtgata 1294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggatacgaagaagaatgaaacaggtgaagataaaaatgataaagaggcaaacagtgata 180
Query: 1295 accaaccaactggtgaacatgatagacccgatacccctgatagaaggcatgataggaaaa 1354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 accaaccaactggtgaacatgatagacccgatacccctgatagaaggcatgataggaaaa 240
Query: 1355 gcagagagagagaccaccgagatagggaacttaaacgagaaaaagaaagggaacttgaaa 1414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcagagagagagaccaccgagatagggaacttaaacgagaaaaagaaagggaacttgaaa 300
Query: 1415 gatatgaaaaagaagctgagcgggaacgtattcggaaagagagggaacagagacgaagga 1474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatatgaaaaagaagctgagcgggaacgtattcggaaagagagggaacagagacgaagga 360
Query: 1475 ctgaggaggctgagcgtcagtatgaatcatatttgaaggaatgggagtat 1524
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctgaggaggctgagcgtcagtatgaatcatatttgaaggaatgggagtat 410
>gnl|LJGI|TC79312
Length = 620
Score = 611 bits (308), Expect = e-174
Identities = 317/320 (99%)
Strand = Plus / Plus
Query: 1604 tactttatgatgaagaggatgaagatgaggattctaggaagaggtggcgtagaaatgtac 1663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tactttatgatgaagaggatgaagatgaggattctaggaagaggtggcgtagaaatgtac 321
Query: 1664 tagaggagaagaggaagaggagggtgcgtgaaaaggaagatgacttggctgacaaacaaa 1723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tagaggagaagaggaagaggagggtgcgtgaaaaggaagatgacttggctgacaaacaaa 381
Query: 1724 aagaagaggaagaaattgttgatgccaagaagagggctgaggaggatcaacgacagaagc 1783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aagaagaggaagaaattgttgatgccaagaagagggctgaggaggatcaacgacagaagc 441
Query: 1784 agcagagagatgctttaaagctattgtcagagcatgtagtaaacagtggtgaggaaacta 1843
| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 442 aacagagagatgctttaaagctattgtcagaacatgtagtaaacagtggtgaggaaacta 501
Query: 1844 tggctactgaagagattgctaaggaagtaaaatatattgatgctgaaaaagatactgtag 1903
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 502 tggctactgaagagattgctaaggaagtaaaatatattgatgctgaacaagatactgtag 561
Query: 1904 ctcattatagtcgtgaaggt 1923
||||||||||||||||||||
Sbjct: 562 ctcattatagtcgtgaaggt 581
Score = 349 bits (176), Expect = 4e-95
Identities = 176/176 (100%)
Strand = Plus / Plus
Query: 1343 atgataggaaaagcagagagagagaccaccgagatagggaacttaaacgagaaaaagaaa 1402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 atgataggaaaagcagagagagagaccaccgagatagggaacttaaacgagaaaaagaaa 61
Query: 1403 gggaacttgaaagatatgaaaaagaagctgagcgggaacgtattcggaaagagagggaac 1462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gggaacttgaaagatatgaaaaagaagctgagcgggaacgtattcggaaagagagggaac 121
Query: 1463 agagacgaaggactgaggaggctgagcgtcagtatgaatcatatttgaaggaatgg 1518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 agagacgaaggactgaggaggctgagcgtcagtatgaatcatatttgaaggaatgg 177
>gnl|LJGI|TC70330 similar to UniRef100_A7Q2D0 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 1339
Score = 494 bits (249), Expect = e-138
Identities = 252/253 (99%)
Strand = Plus / Plus
Query: 1680 gaggagggtgcgtgaaaaggaagatgacttggctgacaaacaaaaagaagaggaagaaat 1739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gaggagggtgcgtgaaaaggaagatgacttggctgacaaacaaaaagaagaggaagaaat 61
Query: 1740 tgttgatgccaagaagagggctgaggaggatcaacgacagaagcagcagagagatgcttt 1799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tgttgatgccaagaagagggctgaggaggatcaacgacagaagcagcagagagatgcttt 121
Query: 1800 aaagctattgtcagagcatgtagtaaacagtggtgaggaaactatggctactgaagagat 1859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aaagctattgtcagagcatgtagtaaacagtggtgaggaaactatggctactgaagagat 181
Query: 1860 tgctaaggaagtaaaatatattgatgctgaaaaagatactgtagctcattatagtcgtga 1919
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 182 tgctaaggaagtaaaatatattgatgctgaacaagatactgtagctcattatagtcgtga 241
Query: 1920 aggtcatattggt 1932
|||||||||||||
Sbjct: 242 aggtcatattggt 254
>gnl|LJGI|BP065554
Length = 549
Score = 200 bits (101), Expect = 2e-50
Identities = 101/101 (100%)
Strand = Plus / Plus
Query: 427 ggtattccacgttaccccccaccttatggaactatgctccggccggtatatcctccacgc 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ggtattccacgttaccccccaccttatggaactatgctccggccggtatatcctccacgc 508
Query: 487 cctcatggagcacttaatgttgctccagtatcacgccctcc 527
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 cctcatggagcacttaatgttgctccagtatcacgccctcc 549