Miyakogusa Predicted Gene
- Lj2g3v1391590.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1391590.1 tr|A2VC28|A2VC28_LOTJA Spermidine synthase
(Fragment) OS=Lotus japonicus GN=spds PE=2
SV=1,99.09,0,SPERMIDINE_SYNTHASE_1,Spermidine/spermine synthases
family; SPERMIDINE SYNTHASE,NULL; SPERMIDINE/SPE,CUFF.36958.1
(1002 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61332 UniRef100_A2VC28 Cluster: Spermidine synthase; ... 1879 0.0
gnl|LJGI|TC76651 homologue to UniRef100_A0EVX4 Cluster: Spermidi... 722 0.0
gnl|LJGI|BW622725 UniRef100_A2VC28 Cluster: Spermidine synthase;... 613 e-175
gnl|LJGI|BP077090 homologue to UniRef100_Q9ZTR0 Cluster: Spermid... 109 3e-23
>gnl|LJGI|TC61332 UniRef100_A2VC28 Cluster: Spermidine synthase; n=1; Lotus
japonicus|Rep: Spermidine synthase - Lotus japonicus,
complete
Length = 1293
Score = 1879 bits (948), Expect = 0.0
Identities = 984/1002 (98%)
Strand = Plus / Plus
Query: 1 atggcggcagagaacgtagcagctgatttaccagtcaagaggcagcgnnnnnnnnnnnnn 60
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35 atggcggcagagaacgtagcagctgatttaccagtcaagaggcagcgagaagaagaagaa 94
Query: 61 nnnnnccaacaaaatggcctctctcagaacgattcttccacgcctcaagggctatctgct 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 gaagaccaacaaaatggcctctctcagaacgattcttccacgcctcaagggctatctgct 154
Query: 121 gttattcctggatggttctctgaaattagcccaatgtggcctggggaagcacactccttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 gttattcctggatggttctctgaaattagcccaatgtggcctggggaagcacactccttg 214
Query: 181 aaggtggaaaagattttgtttcaaggaaagtctgattatcagaatgtcatggtcttccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 aaggtggaaaagattttgtttcaaggaaagtctgattatcagaatgtcatggtcttccag 274
Query: 241 tcatccacgtatggcaaggttcttgttttggatggagtcattcagctcacagaaagggat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 tcatccacgtatggcaaggttcttgttttggatggagtcattcagctcacagaaagggat 334
Query: 301 gagtgtgcctaccaagagatgatcactcatcttcctctctgttctattccaaatcccaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gagtgtgcctaccaagagatgatcactcatcttcctctctgttctattccaaatcccaaa 394
Query: 361 aaggttttggttattggtggaggagatggtggagtcctgcgggaagtatcacgtcattcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 aaggttttggttattggtggaggagatggtggagtcctgcgggaagtatcacgtcattcg 454
Query: 421 tcagtagaaaagatcgacatttgtgaaatagacaagatggttgttgatgtctccaaagag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tcagtagaaaagatcgacatttgtgaaatagacaagatggttgttgatgtctccaaagag 514
Query: 481 tttttccctgatattgctgtaggttttgaggacccacgtgtctcccttcatatcggtgat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 tttttccctgatattgctgtaggttttgaggacccacgtgtctcccttcatatcggtgat 574
Query: 541 ggagttgcatttttgaaggcagctccagaaggatcttatgatgcagtaatagtggattca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 ggagttgcatttttgaaggcagctccagaaggatcttatgatgcagtaatagtggattca 634
Query: 601 tccgaccctataggtcctgctcaagagctttttgaaaagcctttcttttcatcggttgca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 tccgaccctataggtcctgctcaagagctttttgaaaagcctttcttttcatcggttgca 694
Query: 661 agggctcttcgtcctggaggtgttgtgtgtactcaagcagaaagtatatggctccatatg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 agggctcttcgtcctggaggtgttgtgtgtactcaagcagaaagtatatggctccatatg 754
Query: 721 catatcattgaggacattgtggcaaactgtcgccagatattcaaaggttctgtcaactat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 catatcattgaggacattgtggcaaactgtcgccagatattcaaaggttctgtcaactat 814
Query: 781 gcttggaccaccgttcccacatacccaagtgggatgattggttttatgctttgctcaact 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 gcttggaccaccgttcccacatacccaagtgggatgattggttttatgctttgctcaact 874
Query: 841 gagggtccttctgttgatttcaagcatccagtgaatcctatagatgaggatgatagtcag 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 gagggtccttctgttgatttcaagcatccagtgaatcctatagatgaggatgatagtcag 934
Query: 901 cagtcagcaagaccattgaaattttacaaccgtgagattcattcagctgctttctgtttg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 935 cagtcagcaagaccattgaaattttacaaccgtgagattcattcagctgctttctgtttg 994
Query: 961 ccatcttttgctaagagagctattggtgctaaagcaaattga 1002
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 995 ccatcttttgctaagagagctattggtgctaaagcaaattga 1036
>gnl|LJGI|TC76651 homologue to UniRef100_A0EVX4 Cluster: Spermidine synthase; n=1;
Ammopiptanthus mongolicus|Rep: Spermidine synthase -
Ammopiptanthus mongolicus, partial (69%)
Length = 833
Score = 722 bits (364), Expect = 0.0
Identities = 583/656 (88%)
Strand = Plus / Plus
Query: 124 attcctggatggttctctgaaattagcccaatgtggcctggggaagcacactccttgaag 183
||||| || |||||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 178 attccgggttggttctctgaaattagcccaatgtggcctggagaggctcactccttgaag 237
Query: 184 gtggaaaagattttgtttcaaggaaagtctgattatcagaatgtcatggtcttccagtca 243
|| |||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct: 238 gtagaaaagattttgtttcaagggaagtctgattaccagaaagtcatggtcttccagtca 297
Query: 244 tccacgtatggcaaggttcttgttttggatggagtcattcagctcacagaaagggatgag 303
|| ||||||||||||||||||||||||||||| || |||||||| ||||||||||| ||
Sbjct: 298 tcaacgtatggcaaggttcttgttttggatggtgttattcagctaacagaaagggacgaa 357
Query: 304 tgtgcctaccaagagatgatcactcatcttcctctctgttctattccaaatcccaaaaag 363
||||| |||||||| ||||| ||||||||| |||| || ||||||||||| |||||||||
Sbjct: 358 tgtgcttaccaagaaatgatgactcatcttgctctttgctctattccaaaccccaaaaag 417
Query: 364 gttttggttattggtggaggagatggtggagtcctgcgggaagtatcacgtcattcgtca 423
||||||||||| |||||||| ||||| || |||| |||||| ||||||||||||| |||
Sbjct: 418 gttttggttatcggtggaggtgatggagggatcctacgggaaatatcacgtcattcttca 477
Query: 424 gtagaaaagatcgacatttgtgaaatagacaagatggttgttgatgtctccaaagagttt 483
|| |||||||| |||||||||||||| ||||| ||||| ||||||||||||||| |||||
Sbjct: 478 gttgaaaagatagacatttgtgaaattgacaaaatggtagttgatgtctccaaacagttt 537
Query: 484 ttccctgatattgctgtaggttttgaggacccacgtgtctcccttcatatcggtgatgga 543
||||||||| |||| ||||| ||||| || | |||||| | |||| ||||||||||||
Sbjct: 538 ttccctgatgttgcagtagggtttgatgatcaacgtgtgacacttcgcatcggtgatgga 597
Query: 544 gttgcatttttgaaggcagctccagaaggatcttatgatgcagtaatagtggattcatcc 603
|||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 598 gttgcatttttgaaggaagctccagaaggatcttatgatgcagttatagtggattcatct 657
Query: 604 gaccctataggtcctgctcaagagctttttgaaaagcctttcttttcatcggttgcaagg 663
|||||||| ||||||||||| ||||||||||| ||||| || || | |||||||| |
Sbjct: 658 gaccctattggtcctgctcaggagctttttgagaagccctttttcgagttggttgcaaag 717
Query: 664 gctcttcgtcctggaggtgttgtgtgtactcaagcagaaagtatatggctccatatgcat 723
||||||||||| ||||| ||| | |||||||| ||||||||||||||||| |||||||||
Sbjct: 718 gctcttcgtccaggaggagttatttgtactcaggcagaaagtatatggcttcatatgcat 777
Query: 724 atcattgaggacattgtggcaaactgtcgccagatattcaaaggttctgtcaacta 779
|||||||||||||||||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 778 atcattgaggacattgtggctaattgtcgtcagatttttaaaggctctgtcaacta 833
>gnl|LJGI|BW622725 UniRef100_A2VC28 Cluster: Spermidine synthase; n=1; Lotus
japonicus|Rep: Spermidine synthase - Lotus japonicus,
partial (35%)
Length = 470
Score = 613 bits (309), Expect = e-175
Identities = 345/363 (95%)
Strand = Plus / Plus
Query: 1 atggcggcagagaacgtagcagctgatttaccagtcaagaggcagcgnnnnnnnnnnnnn 60
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 atggcggcagagaacgtagcagctgatttaccagtcaagaggcagcgagaagaagaagaa 167
Query: 61 nnnnnccaacaaaatggcctctctcagaacgattcttccacgcctcaagggctatctgct 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 gaagaccaacaaaatggcctctctcagaacgattcttccacgcctcaagggctatctgct 227
Query: 121 gttattcctggatggttctctgaaattagcccaatgtggcctggggaagcacactccttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 gttattcctggatggttctctgaaattagcccaatgtggcctggggaagcacactccttg 287
Query: 181 aaggtggaaaagattttgtttcaaggaaagtctgattatcagaatgtcatggtcttccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 aaggtggaaaagattttgtttcaaggaaagtctgattatcagaatgtcatggtcttccag 347
Query: 241 tcatccacgtatggcaaggttcttgttttggatggagtcattcagctcacagaaagggat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 tcatccacgtatggcaaggttcttgttttggatggagtcattcagctcacagaaagggat 407
Query: 301 gagtgtgcctaccaagagatgatcactcatcttcctctctgttctattccaaatcccaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gagtgtgcctaccaagagatgatcactcatcttcctctctgttctattccaaatcccaaa 467
Query: 361 aag 363
|||
Sbjct: 468 aag 470
>gnl|LJGI|BP077090 homologue to UniRef100_Q9ZTR0 Cluster: Spermidine synthase 2; n=1;
Pisum sativum|Rep: Spermidine synthase 2 - Pisum sativum
(Garden pea), partial (15%)
Length = 366
Score = 109 bits (55), Expect = 3e-23
Identities = 124/147 (84%)
Strand = Plus / Minus
Query: 832 tgctcaactgagggtccttctgttgatttcaagcatccagtgaatcctatagatgaggat 891
|||||||||||||| ||| |||||||||||||||||||||||||||| |||||||| |
Sbjct: 366 tgctcaactgagggacctcctgttgatttcaagcatccagtgaatcccatagatgaaaaa 307
Query: 892 gatagtcagcagtcagcaagaccattgaaattttacaaccgtgagattcattcagctgct 951
|| ||||| | || | | ||||| | |||||||||||| |||||| ||| | || |||
Sbjct: 306 gagtgtcagaaatccgtacgaccacttaaattttacaactctgagatccatactgcagct 247
Query: 952 ttctgtttgccatcttttgctaagaga 978
|||||||||||||| ||||| ||||||
Sbjct: 246 ttctgtttgccatcatttgcgaagaga 220