Miyakogusa Predicted Gene

Lj2g3v1389260.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1389260.1 tr|G7JMY5|G7JMY5_MEDTR TIR-NBS-LRR RCT1-like
resistance protein OS=Medicago truncatula
GN=MTR_4g0150,69.23,0.000000004,TIR,Toll/interleukin-1 receptor
homology (TIR) domain,73617_g.1
         (144 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC61438 weakly similar to UniRef100_A2Q6G5 Cluster: TIR...    98   2e-20
gnl|LJGI|FS326053 weakly similar to UniRef100_A2Q6G5 Cluster: TI...    92   1e-18

>gnl|LJGI|TC61438 weakly similar to UniRef100_A2Q6G5 Cluster: TIR; n=1; Medicago
           truncatula|Rep: TIR - Medicago truncatula (Barrel
           medic), partial (33%)
          Length = 751

 Score = 97.6 bits (49), Expect = 2e-20
 Identities = 79/89 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagtgtcacagaaccataggcctagcggttctgccggtgttctacgacgtagatccg 60
           ||||| |||||||||||||||||||  | |||||||||||||||||||| ||| ||||| 
Sbjct: 630 atggactgtcacagaaccataggccaggtggttctgccggtgttctacggcgtcgatccc 689

                                        
Query: 61  tcagaagtgcggcggcaaactggtgagtt 89
           || ||||||||||| ||||| ||||||||
Sbjct: 690 tctgaagtgcggcgccaaaccggtgagtt 718


>gnl|LJGI|FS326053 weakly similar to UniRef100_A2Q6G5 Cluster: TIR; n=1; Medicago
           truncatula|Rep: TIR - Medicago truncatula (Barrel
           medic), partial (31%)
          Length = 695

 Score = 91.7 bits (46), Expect = 1e-18
 Identities = 76/86 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagtgtcacagaaccataggcctagcggttctgccggtgttctacgacgtagatccg 60
           ||||| |||||||||||||||||||  | ||||||||||||||||||||  || ||||| 
Sbjct: 564 atggactgtcacagaaccataggccaggtggttctgccggtgttctacggtgtcgatccc 623

                                     
Query: 61  tcagaagtgcggcggcaaactggtga 86
           || ||||||||||| |||||||||||
Sbjct: 624 tctgaagtgcggcgccaaactggtga 649