Miyakogusa Predicted Gene
- Lj2g3v1378900.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1378900.1 tr|G7K1H7|G7K1H7_MEDTR AP-1 complex subunit
gamma-1 OS=Medicago truncatula GN=MTR_5g034780 PE=4
SV=1,91.63,0,Adaptin C-terminal domain,Clathrin adaptor,
alpha/beta/gamma-adaptin, appendage, Ig-like subdomain; ,CUFF.36916.1
(2613 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65554 homologue to UniRef100_Q9ZUI6 Cluster: T2K10.12... 1201 0.0
gnl|LJGI|TC75338 similar to UniRef100_A7Q2E8 Cluster: Chromosome... 287 2e-76
>gnl|LJGI|TC65554 homologue to UniRef100_Q9ZUI6 Cluster: T2K10.12 protein; n=1;
Arabidopsis thaliana|Rep: T2K10.12 protein - Arabidopsis
thaliana (Mouse-ear cress), partial (23%)
Length = 803
Score = 1201 bits (606), Expect = 0.0
Identities = 606/606 (100%)
Strand = Plus / Plus
Query: 1 atgaaccctttctcctccggcacgcggctcagggatatgattcgagccatacgtgcttgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 atgaaccctttctcctccggcacgcggctcagggatatgattcgagccatacgtgcttgc 257
Query: 61 aagactgcagcagaagaacgtgctgttgtaagaaaagaatgtgctgccattcgtgattca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 aagactgcagcagaagaacgtgctgttgtaagaaaagaatgtgctgccattcgtgattca 317
Query: 121 ataaatgcaaacgatcatgactataggcatcgaaatctggctaagctaatgttcatccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ataaatgcaaacgatcatgactataggcatcgaaatctggctaagctaatgttcatccat 377
Query: 181 atgcttggttatcccacacattttggtcaaatggagtgcctcaagttgatagcatctcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 atgcttggttatcccacacattttggtcaaatggagtgcctcaagttgatagcatctcca 437
Query: 241 ggatttccagagaagagaataggttatcttggcctcatgttgcttcttgatgaaaggcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ggatttccagagaagagaataggttatcttggcctcatgttgcttcttgatgaaaggcaa 497
Query: 301 gaagttctgatgttggtcaccaattctgtaaaacaagatcttaatcacacaaatcagtat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gaagttctgatgttggtcaccaattctgtaaaacaagatcttaatcacacaaatcagtat 557
Query: 361 attgtgggacttgcactttgtgctttaggaaacatttgttcagcagaaatggctcgggat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 attgtgggacttgcactttgtgctttaggaaacatttgttcagcagaaatggctcgggat 617
Query: 421 cttgcaccagaggttgagagattgctgcaatttcgtgatccaaatattcggaagaaggca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 cttgcaccagaggttgagagattgctgcaatttcgtgatccaaatattcggaagaaggca 677
Query: 481 gcattatgctctataagaatcataaagaaagttccagacttggcagaaaattttatcaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gcattatgctctataagaatcataaagaaagttccagacttggcagaaaattttatcaat 737
Query: 541 cctgctacttccttacttagggagaaacatcatggagttttgattgctggtgttcagctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 cctgctacttccttacttagggagaaacatcatggagttttgattgctggtgttcagctt 797
Query: 601 tgtgca 606
||||||
Sbjct: 798 tgtgca 803
>gnl|LJGI|TC75338 similar to UniRef100_A7Q2E8 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 633
Score = 287 bits (145), Expect = 2e-76
Identities = 145/145 (100%)
Strand = Plus / Plus
Query: 2469 tgggtccataactcaaactttgagagttacaaataaccaacatggaaagaaatctcttgt 2528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgggtccataactcaaactttgagagttacaaataaccaacatggaaagaaatctcttgt 60
Query: 2529 catgcgcataaggatagcatacaagataaatggcaaagatgcactggaggaaggacaaat 2588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 catgcgcataaggatagcatacaagataaatggcaaagatgcactggaggaaggacaaat 120
Query: 2589 cagtaattttcctcgtgatttatga 2613
|||||||||||||||||||||||||
Sbjct: 121 cagtaattttcctcgtgatttatga 145