Miyakogusa Predicted Gene

Lj2g3v1378900.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1378900.1 tr|G7K1H7|G7K1H7_MEDTR AP-1 complex subunit
gamma-1 OS=Medicago truncatula GN=MTR_5g034780 PE=4
SV=1,91.63,0,Adaptin C-terminal domain,Clathrin adaptor,
alpha/beta/gamma-adaptin, appendage, Ig-like subdomain; ,CUFF.36916.1
         (2613 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65554 homologue to UniRef100_Q9ZUI6 Cluster: T2K10.12...  1201   0.0  
gnl|LJGI|TC75338 similar to UniRef100_A7Q2E8 Cluster: Chromosome...   287   2e-76

>gnl|LJGI|TC65554 homologue to UniRef100_Q9ZUI6 Cluster: T2K10.12 protein; n=1;
           Arabidopsis thaliana|Rep: T2K10.12 protein - Arabidopsis
           thaliana (Mouse-ear cress), partial (23%)
          Length = 803

 Score = 1201 bits (606), Expect = 0.0
 Identities = 606/606 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaaccctttctcctccggcacgcggctcagggatatgattcgagccatacgtgcttgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 atgaaccctttctcctccggcacgcggctcagggatatgattcgagccatacgtgcttgc 257

                                                                       
Query: 61  aagactgcagcagaagaacgtgctgttgtaagaaaagaatgtgctgccattcgtgattca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 aagactgcagcagaagaacgtgctgttgtaagaaaagaatgtgctgccattcgtgattca 317

                                                                       
Query: 121 ataaatgcaaacgatcatgactataggcatcgaaatctggctaagctaatgttcatccat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ataaatgcaaacgatcatgactataggcatcgaaatctggctaagctaatgttcatccat 377

                                                                       
Query: 181 atgcttggttatcccacacattttggtcaaatggagtgcctcaagttgatagcatctcca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 atgcttggttatcccacacattttggtcaaatggagtgcctcaagttgatagcatctcca 437

                                                                       
Query: 241 ggatttccagagaagagaataggttatcttggcctcatgttgcttcttgatgaaaggcaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ggatttccagagaagagaataggttatcttggcctcatgttgcttcttgatgaaaggcaa 497

                                                                       
Query: 301 gaagttctgatgttggtcaccaattctgtaaaacaagatcttaatcacacaaatcagtat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gaagttctgatgttggtcaccaattctgtaaaacaagatcttaatcacacaaatcagtat 557

                                                                       
Query: 361 attgtgggacttgcactttgtgctttaggaaacatttgttcagcagaaatggctcgggat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 attgtgggacttgcactttgtgctttaggaaacatttgttcagcagaaatggctcgggat 617

                                                                       
Query: 421 cttgcaccagaggttgagagattgctgcaatttcgtgatccaaatattcggaagaaggca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 cttgcaccagaggttgagagattgctgcaatttcgtgatccaaatattcggaagaaggca 677

                                                                       
Query: 481 gcattatgctctataagaatcataaagaaagttccagacttggcagaaaattttatcaat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gcattatgctctataagaatcataaagaaagttccagacttggcagaaaattttatcaat 737

                                                                       
Query: 541 cctgctacttccttacttagggagaaacatcatggagttttgattgctggtgttcagctt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 cctgctacttccttacttagggagaaacatcatggagttttgattgctggtgttcagctt 797

                 
Query: 601 tgtgca 606
           ||||||
Sbjct: 798 tgtgca 803


>gnl|LJGI|TC75338 similar to UniRef100_A7Q2E8 Cluster: Chromosome chr1 scaffold_46,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr1 scaffold_46, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (6%)
          Length = 633

 Score =  287 bits (145), Expect = 2e-76
 Identities = 145/145 (100%)
 Strand = Plus / Plus

                                                                        
Query: 2469 tgggtccataactcaaactttgagagttacaaataaccaacatggaaagaaatctcttgt 2528
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    tgggtccataactcaaactttgagagttacaaataaccaacatggaaagaaatctcttgt 60

                                                                        
Query: 2529 catgcgcataaggatagcatacaagataaatggcaaagatgcactggaggaaggacaaat 2588
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   catgcgcataaggatagcatacaagataaatggcaaagatgcactggaggaaggacaaat 120

                                     
Query: 2589 cagtaattttcctcgtgatttatga 2613
            |||||||||||||||||||||||||
Sbjct: 121  cagtaattttcctcgtgatttatga 145