Miyakogusa Predicted Gene
- Lj2g3v1378880.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1378880.1 Non Chatacterized Hit- tr|I1MSW4|I1MSW4_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,31.68,0.0005,RING/U-box,NULL; Ring finger,Zinc finger, RING-type;
no description,Zinc finger, RING/FYVE/PHD-type;,CUFF.36896.1
(1129 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63161 similar to UniRef100_A7PD41 Cluster: Chromosome... 1961 0.0
gnl|LJGI|TC71555 similar to UniRef100_A7PD41 Cluster: Chromosome... 54 2e-06
gnl|LJGI|FS361418 similar to UniRef100_A7Q2E7 Cluster: Chromosom... 52 8e-06
>gnl|LJGI|TC63161 similar to UniRef100_A7PD41 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (60%)
Length = 1033
Score = 1961 bits (989), Expect = 0.0
Identities = 1019/1030 (98%), Gaps = 1/1030 (0%)
Strand = Plus / Plus
Query: 100 tccccttcattacctgacaattctaactaccagaaacaatcagcttcttcatctgggaat 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tccccttcattacctgacaattctaactaccagaaacaatcagcttcttcatctgggaat 60
Query: 160 agaataagccctgcagttattttcatcatagtaattctagctgttgtgtttttcatcttg 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agaataagccctgcagttattttcatcatagtaattctagctgttgtgtttttcatcttg 120
Query: 220 ggcttcctacacttgctagttagatttctctcaaagcataggtcctcttcatcaatttct 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggcttcctacacttgctagttagatttctctcaaagcataggtcctcttcatcaatttct 180
Query: 280 gaatccaacagataccctgaaatctctgaatctgatgcttaccagagacagttgcagaac 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaatccaacagataccctgaaatctctgaatctgatgcttaccagagacagttgcagaac 240
Query: 340 ctcttccatcttcatgattcaggcctggatcaggctttcatagatgccctcccagttttc 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctcttccatcttcatgattcaggcctggatcaggctttcatagatgccctcccagttttc 300
Query: 400 tattacaaagagataataggcttgaaagagccatttgattgtgcagtttgcctctgtgag 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tattacaaagagataataggcttgaaagagccatttgattgtgcagtttgcctctgtgag 360
Query: 460 ttcttggaacaggacaagctgagattgctcccagtctgcaaccatgcttttcacatagac 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttcttggaacaggacaagctgagattgctcccagtctgcaaccatgcttttcacatagac 420
Query: 520 tgcatagacacatggttactgtccaattcaacttgtcctctatgcagagggactctctat 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgcatagacacatggttactgtccaattcaacttgtcctctatgcagagggactctctat 480
Query: 580 gcatctggattttcatttgagaatcctgtgtttgactttgagggtccaaaggaggaagat 639
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 481 gcatctggattttcatttgagaatcctgtgtttgactttgagggtccaaagggggaagat 540
Query: 640 ggggtttcagtttcaggtagtggtggttctgttaacaagcctagtgagaatcacataatg 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggggtttcagtttcaggtagtggtggttctgttaacaagcctagtgagaatcacataatg 600
Query: 700 agtgggaagagggtgttttctgtgaggcttgggaaattcagaagctcaaatattggagtt 759
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 601 agtgggaagagggtgttttctgtga-gcttgggaaattcagaagctcaaatattggagtt 659
Query: 760 agtgtggaaagatgtgaaggagagagcagtaatggtaatttggatgcaagaagatgctat 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 agtgtggaaagatgtgaaggagagagcagtaatggtaatttggatgcaagaagatgctat 719
Query: 820 tcaatgggttcttttcagtatgttgttgctgattcagatttgagagtggctttgagatcc 879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 tcaatgggttcttttcagtatgttgttgctgattcagatttgagagtggctttgagatcc 779
Query: 880 agtagaggtgatggtagcatgagacaacaactcaagggaatagcagccacaaatttgatg 939
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 780 agtagaggtgatggtagcatgagacaacaactcaagggaatagtagccacaaatttgatg 839
Query: 940 agttcttcaactgatggggatgttgagggtnnnnnnntcaacaatgcaaggaaaggtgaa 999
|||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 840 agttcttcaactgatggggatgttgagggtaaaaaaatcaacaatgcaaggaaaggcgaa 899
Query: 1000 agcttttctgtttccaagatctggcaatggtctaggaaagaaaagttaacaagtttatca 1059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 agcttttctgtttccaagatctggcaatggtctaggaaagaaaagttaacaagtttatca 959
Query: 1060 gatacccattttcataattcaactgtgactgcaactttgccatggatcaataaagctaga 1119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 gatacccattttcataattcaactgtgactgcaactttgccatggatcaataaagctaga 1019
Query: 1120 ggtacatgat 1129
||||||||||
Sbjct: 1020 ggtacatgat 1029
>gnl|LJGI|TC71555 similar to UniRef100_A7PD41 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (59%)
Length = 1842
Score = 54.0 bits (27), Expect = 2e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 794 gtaatttggatgcaagaagatgctattcaatgggttctt 832
|||||||||||||||||||||| || |||||||| ||||
Sbjct: 1335 gtaatttggatgcaagaagatgttactcaatgggatctt 1373
>gnl|LJGI|FS361418 similar to UniRef100_A7Q2E7 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (51%)
Length = 757
Score = 52.0 bits (26), Expect = 8e-06
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 794 gtaatttggatgcaagaagatgctattcaatgggttcttttcagtatgttgttg 847
||||||||||||||||||| || || |||||||| |||| |||||||| ||||
Sbjct: 459 gtaatttggatgcaagaaggtgttactcaatgggatcttaccagtatgtggttg 406