Miyakogusa Predicted Gene
- Lj2g3v1378790.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1378790.3 Non Chatacterized Hit- tr|I3SP05|I3SP05_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.55,0,Multidrug
resistance efflux transporter EmrE,NULL; EamA,Drug/metabolite
transporter; FAMILY NOT NAME,CUFF.36907.3
(1041 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74031 weakly similar to UniRef100_A7Q2G5 Cluster: Chr... 2048 0.0
gnl|LJGI|TC70635 weakly similar to UniRef100_A7PD50 Cluster: Chr... 1164 0.0
gnl|LJGI|TC60515 weakly similar to UniRef100_A7PMD8 Cluster: Chr... 652 0.0
gnl|LJGI|FS342789 similar to UniRef100_A7PMD7 Cluster: Chromosom... 285 3e-76
>gnl|LJGI|TC74031 weakly similar to UniRef100_A7Q2G5 Cluster: Chromosome chr1
scaffold_46, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_46, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (60%)
Length = 1279
Score = 2048 bits (1033), Expect = 0.0
Identities = 1039/1041 (99%)
Strand = Plus / Plus
Query: 1 atggtgagtgaaggggtgactgtgacaacagcaatggttgcaactcagctcttggaagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 atggtgagtgaaggggtgactgtgacaacagcaatggttgcaactcagctcttggaagtg 138
Query: 61 ggcttgaacactctagtgaagtcagccaccgacagtggaatgagcaactatgttttcatt 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 139 ggcttgaacactctagtgaagtcagccaccgacagtggattgagcaactatgttttcatt 198
Query: 121 gtctactcaaaccttttggctctctgtttccttctaccagccaccatcctctaccacagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 gtctactcaaaccttttggctctctgtttccttctaccagccaccatcctctaccacagg 258
Query: 181 aagagtgctcctcccccaattccaagctcaattctccgcagaatatttcttctttcttgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aagagtgctcctcccccaattccaagctcaattctccgcagaatatttcttctttcttgc 318
Query: 241 ctcagtactgcagtgcagactttgctgtacaatggaattggatatagctctcccacactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ctcagtactgcagtgcagactttgctgtacaatggaattggatatagctctcccacactg 378
Query: 301 gcctcagctatgatagaccttgtccctgcttttaccttcacactggctgtaatttccagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gcctcagctatgatagaccttgtccctgcttttaccttcacactggctgtaatttccagg 438
Query: 361 atggaaaatctgaacctgaaactgcatagcagccaggcgaaaattgttggtacacttgtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 atggaaaatctgaacctgaaactgcatagcagccaggcgaaaattgttggtacacttgtc 498
Query: 421 tccattgcaggggcattaatcttgactttataccaaggaatgccaattattagaggttct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tccattgcaggggcattaatcttgactttataccaaggaatgccaattattagaggttct 558
Query: 481 atgcaaaatttagtattgggaggaagtggaacttacctctcagtgcaatcaaattggata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 atgcaaaatttagtattgggaggaagtggaacttacctctcagtgcaatcaaattggata 618
Query: 541 cttggtggttttcttcttgcaactgcttgctttattgtttcagtattgtatattgtacag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 cttggtggttttcttcttgcaactgcttgctttattgtttcagtattgtatattgtacag 678
Query: 601 acttggattatgagggaatatcctgaagagctagtagtaacaaccgtttgttgcagcatg 660
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 679 acttggattatgagggaatatcctgaagagctggtagtaacaaccgtttgttgcagcatg 738
Query: 661 gtggtggtcctatctgccatagtgggtctaattgcagagggaacttcaagagcttggatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 gtggtggtcctatctgccatagtgggtctaattgcagagggaacttcaagagcttggatt 798
Query: 721 ctcagacctgataaagagttggtagctgtgtgttattcagcaatttttgtggtaacgatg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 ctcagacctgataaagagttggtagctgtgtgttattcagcaatttttgtggtaacgatg 858
Query: 781 cggagtgttgtgtatgcatgggcgtttcgtaagaagggaccaatttatgtagctatgttc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 cggagtgttgtgtatgcatgggcgtttcgtaagaagggaccaatttatgtagctatgttc 918
Query: 841 agccctttaggaatggtaattgcggttgtcttgggagtattatttctaggagacattctt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919 agccctttaggaatggtaattgcggttgtcttgggagtattatttctaggagacattctt 978
Query: 901 tatctgggaagcctgattggagctgtcataatagctattggattctatggtgtgatatgg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 979 tatctgggaagcctgattggagctgtcataatagctattggattctatggtgtgatatgg 1038
Query: 961 gcgcaggctcaagaggaaaatgattttgcttcatcttcttcttcagcccctctcatctac 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1039 gcgcaggctcaagaggaaaatgattttgcttcatcttcttcttcagcccctctcatctac 1098
Query: 1021 agcaaaggcatagatgcatag 1041
|||||||||||||||||||||
Sbjct: 1099 agcaaaggcatagatgcatag 1119
>gnl|LJGI|TC70635 weakly similar to UniRef100_A7PD50 Cluster: Chromosome chr17
scaffold_12, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_12, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (32%)
Length = 959
Score = 1164 bits (587), Expect = 0.0
Identities = 752/807 (93%)
Strand = Plus / Plus
Query: 176 acaggaagagtgctcctcccccaattccaagctcaattctccgcagaatatttcttcttt 235
|||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 19 acaggaagagagctcctccaccaattccaagctcaattctccgcagaatatttcttcttt 78
Query: 236 cttgcctcagtactgcagtgcagactttgctgtacaatggaattggatatagctctccca 295
|||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||
Sbjct: 79 cttgcctcagtactgcagtgcagatattgttgtacactggaattggatatagctctccca 138
Query: 296 cactggcctcagctatgatagaccttgtccctgcttttaccttcacactggctgtaattt 355
||||||||||||||||| | ||||| |||||||| |||||||||||||| ||||||||||
Sbjct: 139 cactggcctcagctatggtggacctggtccctgcctttaccttcacacttgctgtaattt 198
Query: 356 ccaggatggaaaatctgaacctgaaactgcatagcagccaggcgaaaattgttggtacac 415
||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||
Sbjct: 199 tcaggatggaaaatctgaacctaaaactacatagcagccaggcgaaaattgttggcacag 258
Query: 416 ttgtctccattgcaggggcattaatcttgactttataccaaggaatgccaattattagag 475
| || ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 259 tagtttccattgcaggggcactaatcttgactttataccaaggaatgccacttattagag 318
Query: 476 gttctatgcaaaatttagtattgggaggaagtggaacttacctctcagtgcaatcaaatt 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 319 gttctatgcaaaatttagtattgggaggaagtggaacttacctctcagtgcaatcaagtt 378
Query: 536 ggatacttggtggttttcttcttgcaactgcttgctttattgtttcagtattgtatattg 595
|||||||||||||||||||||||||||||||| ||||| |||||||| |||| |||||
Sbjct: 379 ggatacttggtggttttcttcttgcaactgctggcttttgcgtttcagttttgtttattg 438
Query: 596 tacagacttggattatgagggaatatcctgaagagctagtagtaacaaccgtttgttgca 655
|||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 439 tacagacttggattatcagggaatatcctgaagagctagtggtcacaaccgtttgttgca 498
Query: 656 gcatggtggtggtcctatctgccatagtgggtctaattgcagagggaacttcaagagctt 715
|||||||||||||||||||||||||||| | | ||||||||||||||||||||| |||||
Sbjct: 499 gcatggtggtggtcctatctgccatagttgctttaattgcagagggaacttcaaaagctt 558
Query: 716 ggattctcagacctgataaagagttggtagctgtgtgttattcagcaatttttgtggtaa 775
|| ||||||||| |||||| ||||||| ||| ||||||||||||||||||||||||||
Sbjct: 559 gggttctcagacttgataaggagttggcagccgtgtgttattcagcaatttttgtggtgt 618
Query: 776 cgatgcggagtgttgtgtatgcatgggcgtttcgtaagaagggaccaatttatgtagcta 835
|| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 619 cgttgcggagtgttgtgtctgcatgggcgtgtcgtaagaagggaccaatttatgtagcta 678
Query: 836 tgttcagccctttaggaatggtaattgcggttgtcttgggagtattatttctaggagaca 895
|||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 679 tgttcaaccctttaggaatggtaattgcggttgtattgggagtattacttctaggagaca 738
Query: 896 ttctttatctgggaagcctgattggagctgtcataatagctattggattctatggtgtga 955
||||||| |||||||||||||||||||| | | ||||||| ||||||| ||||||||||
Sbjct: 739 gtctttatgtgggaagcctgattggagctattacaatagctgttggattttatggtgtga 798
Query: 956 tatgggcgcaggctcaagaggaaaatg 982
| |||||||||||||||||||||||||
Sbjct: 799 tgtgggcgcaggctcaagaggaaaatg 825
>gnl|LJGI|TC60515 weakly similar to UniRef100_A7PMD8 Cluster: Chromosome chr14
scaffold_21, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (30%)
Length = 776
Score = 652 bits (329), Expect = 0.0
Identities = 511/573 (89%), Gaps = 9/573 (1%)
Strand = Plus / Plus
Query: 1 atggtgagtgaaggggtgactgtgacaacagcaatggttgcaactcagctcttggaagtg 60
|||||||||||||| |||| ||| ||| ||| |||||| |||||||| ||||||| |||
Sbjct: 76 atggtgagtgaaggagtgagtgtaacagtagccatggttacaactcagttcttggatgtg 135
Query: 61 ggcttgaacactctagtgaagtcagccaccgacagtggaatgagcaactatgttttcatt 120
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 136 ggcttgaacactctagtgaagtcagccaccaacagtggaatgagcaactatgtttttgtt 195
Query: 121 gtctactcaaaccttttggctctctgtttccttctaccagccaccatcctctaccacagg 180
||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||
Sbjct: 196 gtctactcaaaccttttggctctatgtttccttctaccatccaccatcctctaccatagg 255
Query: 181 aagagtgctcctcccccaattccaagctcaattctccgcagaatatttcttctttcttgc 240
||||| |||||||||||||||||||||||||||||| ||||||| |||||| | ||||||
Sbjct: 256 aagagagctcctcccccaattccaagctcaattctctgcagaatgtttcttatctcttgc 315
Query: 241 ctcagtactgcagtgcagactttgctgtacaatggaattggatatagctctcccacactg 300
|||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||
Sbjct: 316 ctcagtactgcagtgcagactttggtgtacactggaattggatatagctcccccacactg 375
Query: 301 gcctcagctatgatagaccttgtccctgcttttaccttcacactggctgtaatttccagg 360
||||||||| | | |||||||| |||||||||||||||| ||| |||||||||||||||
Sbjct: 376 gcctcagctgcggtggaccttgtgcctgcttttaccttcatacttgctgtaatttccagg 435
Query: 361 atggaaaatctgaacctgaaactgcatagcagccaggcgaaaattgttggtacacttgtc 420
||||||||||||||||||||||||||||| |||||||| ||||||||||| ||| | ||
Sbjct: 436 atggaaaatctgaacctgaaactgcataggagccaggcaaaaattgttggcacagtagtt 495
Query: 421 tccattgcaggggcattaatcttgactttataccaaggaatgccaattattagaggttct 480
||||||||||||||| ||||| |||||||||| |||| |||| |||||||
Sbjct: 496 tccattgcaggggcactaatcatgactttatataaaggggtgccgcttattag------- 548
Query: 481 atgcaaaatttagtattgggaggaagtggaacttacctctcagtgcaatcaaattggata 540
||||||||||| |||||||||| ||||| |||| ||||||||||||||| | ||||||
Sbjct: 549 --gcaaaatttagcattgggaggacgtggagcttatctctcagtgcaatcagactggata 606
Query: 541 cttggtggttttcttcttgcaactgcttgcttt 573
|||||||| ||| |||||||||||||| |||||
Sbjct: 607 cttggtggctttattcttgcaactgctagcttt 639
>gnl|LJGI|FS342789 similar to UniRef100_A7PMD7 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 571
Score = 285 bits (144), Expect = 3e-76
Identities = 171/180 (95%)
Strand = Plus / Plus
Query: 1 atggtgagtgaaggggtgactgtgacaacagcaatggttgcaactcagctcttggaagtg 60
|||||||||||||| |||| ||| ||| |||||||||||||||||||| ||||||||||
Sbjct: 134 atggtgagtgaaggagtgagtgtaacagcagcaatggttgcaactcagttcttggaagta 193
Query: 61 ggcttgaacactctagtgaagtcagccaccgacagtggaatgagcaactatgttttcatt 120
||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||
Sbjct: 194 ggcttgaacactctagtcaagtcagccaccaacagtggaatgagcaactatgttttcatt 253
Query: 121 gtctactcaaaccttttggctctctgtttccttctaccagccaccatcctctaccacagg 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 254 gtctactcaaaccttttggctctctgtttccttctaccatccaccatcctctaccacagg 313
Score = 256 bits (129), Expect = 2e-67
Identities = 159/169 (94%)
Strand = Plus / Plus
Query: 176 acaggaagagtgctcctcccccaattccaagctcaattctccgcagaatatttcttcttt 235
|||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 acaggaagagagctcctccaccaattccaagctcaattctccgcagaatatttcttcttt 460
Query: 236 cttgcctcagtactgcagtgcagactttgctgtacaatggaattggatatagctctccca 295
|||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||
Sbjct: 461 cttgcctcagtactgcagtgcagatattgttgtacactggaattggatatagctctccca 520
Query: 296 cactggcctcagctatgatagaccttgtccctgcttttaccttcacact 344
||||||||||||||||| | ||||| |||||||| ||||||||||||||
Sbjct: 521 cactggcctcagctatggtggacctggtccctgcctttaccttcacact 569