Miyakogusa Predicted Gene

Lj2g3v1374500.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1374500.1 tr|F2EKY1|F2EKY1_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2
SV=1,44.34,3e-18,DUF4228,Protein of unknown function DUF4228;
seg,NULL,CUFF.36861.1
         (528 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64719 similar to UniRef100_A7Q2I5 Cluster: Chromosome...  1015   0.0  

>gnl|LJGI|TC64719 similar to UniRef100_A7Q2I5 Cluster: Chromosome chr1 scaffold_46,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_46, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (82%)
          Length = 705

 Score = 1015 bits (512), Expect = 0.0
 Identities = 524/528 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggggaattgccaagctgtggatgctgcagtgcttgtgatccagcacccaggtgggaag 60
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 68  atggggaattgccaagctgtggatgctgcagtgcttgtaatccagcacccaggtgggaag 127

                                                                       
Query: 61  atagaaaggatgtattggccaatcactgcaagtgaggtcatgaaaactaacccaggtcac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 atagaaaggatgtattggccaatcactgcaagtgaggtcatgaaaactaacccaggtcac 187

                                                                       
Query: 121 tatgtgtctttgataatcccattgcctgtgacagaacaagaacagaggaatcaagagcag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 tatgtgtctttgataatcccattgcctgtgacagaacaagaacagaggaatcaagagcag 247

                                                                       
Query: 181 aaatcagttcgtttcacaggtgtcaagcttctgcgtcctaatgagactctcaatcttgga 240
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 aaatcagttcgtttcacacgtgtcaagcttctgcgtcctaatgagactctcaatcttgga 307

                                                                       
Query: 241 cctgcttacaggctcatccctactcaagaggtcatgaaggtgttgaaagcaaagaagaat 300
           | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 catgcttacaggctcatcactactcaagaggtcatgaaggtgttgaaagcaaagaagaat 367

                                                                       
Query: 301 gcaaagaccaagaagccacaggcagagacaattgagaaaccacagacagaaaagaagagt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 gcaaagaccaagaagccacaggcagagacaattgagaaaccacagacagaaaagaagagt 427

                                                                       
Query: 361 tcaggttgtgagtctcagacagcaggggactctgtctcaggaaatacaaatacaaatcag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tcaggttgtgagtctcagacagcaggggactctgtctcaggaaatacaaatacaaatcag 487

                                                                       
Query: 421 ggaatgagagcagagagacagaggcaaaggggatcagcaaatcctgctgtagtgagatca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ggaatgagagcagagagacagaggcaaaggggatcagcaaatcctgctgtagtgagatca 547

                                                           
Query: 481 aaatcctggcgcccctctttacaaagcatttctgagtttacaagttga 528
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 aaatcctggcgcccctctttacaaagcatttctgagtttacaagttga 595