Miyakogusa Predicted Gene
- Lj2g3v1373360.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1373360.2 Non Chatacterized Hit- tr|G7JAI8|G7JAI8_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,63.27,0.00000000004,no description,Nucleotide-binding,
alpha-beta plait; RRM,RNA recognition motif domain;
coiled-coil,N,CUFF.36859.2
(1341 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64369 weakly similar to UniRef100_A7Q2I2 Cluster: Chr... 1655 0.0
gnl|LJGI|TC57342 similar to UniRef100_A7Q2I2 Cluster: Chromosome... 458 e-128
gnl|LJGI|DC597622 similar to UniRef100_A7Q2I2 Cluster: Chromosom... 402 e-111
gnl|LJGI|AV769520 129 5e-29
>gnl|LJGI|TC64369 weakly similar to UniRef100_A7Q2I2 Cluster: Chromosome chr1
scaffold_46, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_46, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (42%)
Length = 1678
Score = 1655 bits (835), Expect = 0.0
Identities = 838/839 (99%)
Strand = Plus / Plus
Query: 356 gggaagaggtgcttccgttggagcagatgaagcaatggtttgacaagaagccgaaggggt 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gggaagaggtgcttccgttggagcagatgaagcaatggtttgacaagaagccgaaggggt 489
Query: 416 ttggtgaagggaaagtgtacgacacttctgttgaggataagctgctcgaggaattgcgcc 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ttggtgaagggaaagtgtacgacacttctgttgaggataagctgctcgaggaattgcgcc 549
Query: 476 agagtagagaagctcaagctgctaatttggagaagtttaaagccaatcctgtcaagcctg 535
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 550 agagtagagaagctcaagctgctaatttggagaagcttaaagccaatcctgtcaagcctg 609
Query: 536 cctccaacaaaaatgctcaaaaccagaaagatgctgaagttgttccacttggaggtcgag 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 cctccaacaaaaatgctcaaaaccagaaagatgctgaagttgttccacttggaggtcgag 669
Query: 596 tgcttttggcgaacctgccgaagaaaaagaacatccacagggacctgaaatcagctatgc 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 tgcttttggcgaacctgccgaagaaaaagaacatccacagggacctgaaatcagctatgc 729
Query: 656 aaggggttccgggcataataaatatagctccagctgttactggaaacaagaagacaaggg 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 aaggggttccgggcataataaatatagctccagctgttactggaaacaagaagacaaggg 789
Query: 716 atcctatctgcaagggttttgcttttgttgattttaaggacaaaaaggatgcagttaggt 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 atcctatctgcaagggttttgcttttgttgattttaaggacaaaaaggatgcagttaggt 849
Query: 776 ttgtagagttatacactgggcaaactctaacttttggcaaaattcagaagcaaataaaat 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 ttgtagagttatacactgggcaaactctaacttttggcaaaattcagaagcaaataaaat 909
Query: 836 gcgaggttgtaaatgcacagtcttcatcttcttctcctgagttaagcaaaaatcttggtg 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910 gcgaggttgtaaatgcacagtcttcatcttcttctcctgagttaagcaaaaatcttggtg 969
Query: 896 ctcttccacgtctcatggactctccctttgaagaagattcaaatgaggattctaatatgg 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970 ctcttccacgtctcatggactctccctttgaagaagattcaaatgaggattctaatatgg 1029
Query: 956 atgattctgccgtcagttcctgggatgggactgattcaaatgatttggatgaagaacagg 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1030 atgattctgccgtcagttcctgggatgggactgattcaaatgatttggatgaagaacagg 1089
Query: 1016 aaagtgatggagagaatcaagagtatgccactgctttggatgtggatttcgatgacagtg 1075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1090 aaagtgatggagagaatcaagagtatgccactgctttggatgtggatttcgatgacagtg 1149
Query: 1076 tggaaatgacgattgattctgaaattaatccacttccatctgaacagggtaccataaacc 1135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1150 tggaaatgacgattgattctgaaattaatccacttccatctgaacagggtaccataaacc 1209
Query: 1136 ccacagctgagcctgagaagaagtcatctgctaaatttagacaagagagtgcacccaag 1194
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1210 ccacagctgagcctgagaagaagtcatctgctaaatttagacaagagagtgcacccaag 1268
Score = 533 bits (269), Expect = e-151
Identities = 284/289 (98%)
Strand = Plus / Plus
Query: 1 atgctccgagcaactgcgtttccgccaccgttcaattcgccgccggttctccctcgcgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 atgctccgagcaactgcgtttccgccaccgttcaattcgccgccggttctccctcgcgca 134
Query: 61 cacacgtgccattctcttgcacccgcacgtgtcgttcaatcttccccttcttccatttct 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 cacacgtgccattctcttgcacccgcacgtgtcgttcaatcttccccttcttccatttcg 194
Query: 121 aggttcgagtttcgattatttcaacaaccctgcgtgaagagcctgtgcgcggtgcgcggt 180
||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 195 aggttcgagtttcgagtatttcaacaaccctgcgtgaagagcctgcgcgccgtgcgcggt 254
Query: 181 ggcggggtttttacagccgtcgcgaagaagaaaggtcgcggcggagttggtatcgtggga 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ggcggggttgttacagccgtcgcgaagaagaaaggtcgcggcggagttggtatcgtggga 314
Query: 241 gtcgacgaaggttttgacgaggaggaggagggtgatggtattgaatact 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gtcgacgaaggttttgacgaggaggaggagggtgatggtattgaatact 363
Score = 168 bits (85), Expect = 6e-41
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 1257 gttgaagatcaaggagaaggctgtattaactgatgttttctccaagtacggaaaaagagc 1316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1331 gttgaagatcaaggagaaggctgtattaactgatgttttctccaagtacggaaaaagagc 1390
Query: 1317 tgttcttgcttcaaaggataattag 1341
|||||||||||||||||||||||||
Sbjct: 1391 tgttcttgcttcaaaggataattag 1415
>gnl|LJGI|TC57342 similar to UniRef100_A7Q2I2 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 1097
Score = 458 bits (231), Expect = e-128
Identities = 312/339 (92%)
Strand = Plus / Plus
Query: 566 atgctgaagttgttccacttggaggtcgagtgcttttggcgaacctgccgaagaaaaaga 625
|||||| |||| | ||| ||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 239 atgctggagttatcccaattggaggtcgagtgcgtttggcgaacctgccgaagaaaagga 298
Query: 626 acatccacagggacctgaaatcagctatgcaaggggttccgggcataataaatatagctc 685
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 299 acattgacagggacctgaaatcagctatgcaaggggttccgggcataataaatatagttc 358
Query: 686 cagctgttactggaaacaagaagacaagggatcctatctgcaagggttttgcttttgttg 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 cagctgttactggaaacaagaagacaagggatcctatctgcaagggttttgcttttgttg 418
Query: 746 attttaaggacaaaaaggatgcagttaggtttgtagagttatacactgggcaaactctaa 805
|||| ||| |||||||||||||||||||| ||||||||| | | |||| |||||| |||
Sbjct: 419 atttcaagcgcaaaaaggatgcagttaggtgtgtagagttgtgcgctggacaaactataa 478
Query: 806 cttttggcaaaattcagaagcaaataaaatgcgaggttgtaaatgcacagtcttcatctt 865
||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||
Sbjct: 479 cttttggcaaaattcagaagcaaataaaatgtgaggttgttaatgcacagtcttcctctt 538
Query: 866 cttctcctgagttaagcaaaaatcttggtgctcttccac 904
|||||| ||||||||||||||| || ||||||||||
Sbjct: 539 cttctctccagttaagcaaaaatcccggcgctcttccac 577
Score = 81.8 bits (41), Expect = 1e-14
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 1257 gttgaagatcaaggagaaggctgtattaactgatgttttctccaagtacggaaaaagagc 1316
|||||||||| || ||||| || |||||||| | ||||||||||||||||| |||| |
Sbjct: 687 gttgaagatcgagaagaagtctatattaactcgtattttctccaagtacggatcaagacc 746
Query: 1317 tgttcttgcttcaaaggataattag 1341
|||| ||||||||||||||||||||
Sbjct: 747 tgttgttgcttcaaaggataattag 771
Score = 52.0 bits (26), Expect = 9e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1104 tccacttccatctgaacagggtacca 1129
||||||||||||||||||||||||||
Sbjct: 573 tccacttccatctgaacagggtacca 598
>gnl|LJGI|DC597622 similar to UniRef100_A7Q2I2 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 575
Score = 402 bits (203), Expect = e-111
Identities = 273/295 (92%), Gaps = 1/295 (0%)
Strand = Plus / Plus
Query: 566 atgctgaagttgttccacttggaggtcgagtgcttttggcgaacctgccgaagaaaaaga 625
|||||| |||| | ||| ||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 280 atgctggagttatcccaattggaggtcgagtgcgtttggcgaacctgccgaagaaaagga 339
Query: 626 acatccacagggacctgaaatcagctatgcaaggggttccgggcataataaatatagctc 685
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 340 acattgacagggacctgaaatcagctatgcaaggggttccgggcataataaatatagttc 399
Query: 686 cagctgttactggaaacaagaagacaagggatcctatctgcaagggttttgcttttgttg 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 cagctgttactggaaacaagaagacaagggatcctatctgcaagggttttgcttttgttg 459
Query: 746 attttaaggacaaaaaggatgcagttaggtttgtagagttatacactgggcaaactctaa 805
|||| ||| |||||||||||||||||||| ||||||||| | | |||| |||||| |||
Sbjct: 460 atttcaagcgcaaaaaggatgcagttaggtgtgtagagttgtgcgctggacaaactataa 519
Query: 806 cttttggcaaaattcagaagcaaataaaatgcgaggttgtaaatgcacagtcttc 860
|||||||||||||||| |||| ||||||||| |||||||| ||||||||||||||
Sbjct: 520 cttttggcaaaattcaaaagc-aataaaatgtgaggttgttaatgcacagtcttc 573
>gnl|LJGI|AV769520
Length = 362
Score = 129 bits (65), Expect = 5e-29
Identities = 68/69 (98%)
Strand = Plus / Minus
Query: 1273 aaggctgtattaactgatgttttctccaagtacggaaaaagagctgttcttgcttcaaag 1332
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 362 aaggctgtattaactgatgttttctccaagtacgaaaaaagagctgttcttgcttcaaag 303
Query: 1333 gataattag 1341
|||||||||
Sbjct: 302 gataattag 294